RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 IMPG2Q9BZV3 1241 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 SUGCTQ9HAC7 445 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 SUCLA2Q9P2R7 463 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 MYH11P35749 1972 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 IGKV6-21A0A0C4DH24 114 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 CES2O00748 559 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 TOM1L1O75674 476 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 MOCS3O95396 460 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 TNNI1P19237 187 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 AMPD2Q01433 879 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 POU5F1Q01860 360 aaKnown RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 TNFAIP2Q03169 654 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 ITIH3Q06033 890 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 PPP3CAQ08209 521 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 BRD3Q15059 726 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 HSDL1Q3SXM5 330 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 TMCO3Q6UWJ1 677 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 RSRC2Q7L4I2 434 aaKnown RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 RHOT2Q8IXI1 618 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 LMO3Q8TAP4 145 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 U2AF1L4Q8WU68 220 aaKnown RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 PRPF31Q8WWY3 499 aaKnown RBP12.02□□□□□ -0.49
SKA2-204ENST00000578519 FGD4Q96M96 766 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 CEP89Q96ST8 783 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 AGPAT1Q99943 283 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 KIFC3Q9BVG8 833 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 C1orf112Q9NSG2 853 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 SNX12Q9UMY4 172 aa12.02□□□□□ -0.49
SKA2-204ENST00000578519 A0A0B4J269 797 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 A0A0U1RQJ8 604 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 ANKRD62A6NC57 917 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 PEX10O60683 326 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 PHACTR2O75167 634 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 ARIH2O95376 493 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 PRKCBP05771 671 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 ADRB2P07550 413 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 TMEM253P0C7T8 217 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 TBXAS1P24557 533 aaPredicted RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 PHKA2P46019 1235 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 DLG4P78352 724 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 CLDN10P78369 228 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 GCNT1Q02742 428 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 LAMTOR4Q0VGL1 99 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 CAPSQ13938 189 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 GRB14Q14449 540 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 CFAP221Q4G0U5 840 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 CDCA2Q69YH5 1023 aaPredicted RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 EFCAB12Q6NXP0 572 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 PPM1KQ8N3J5 372 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 ATRIPQ8WXE1 791 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 RUBCNQ92622 972 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 PBKQ96KB5 322 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 CGRRF1Q99675 332 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 NFKBIZQ9BYH8 718 aa12.01□□□□□ -0.49
SKA2-204ENST00000578519 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 PRMT7Q9NVM4 692 aaPredicted RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
SKA2-204ENST00000578519 GRID2IPA4D2P6 1211 aa12□□□□□ -0.49
SKA2-204ENST00000578519 TISP43B9A030 160 aa12□□□□□ -0.49
SKA2-204ENST00000578519 FOXN3O00409 490 aaPredicted RBP12□□□□□ -0.49
SKA2-204ENST00000578519 ACKR2O00590 384 aa12□□□□□ -0.49
SKA2-204ENST00000578519 OGTO15294 1046 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ZEB2O60315 1214 aa12□□□□□ -0.49
SKA2-204ENST00000578519 RTN2O75298 545 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
SKA2-204ENST00000578519 SRGAP2CP0DJJ0 459 aa12□□□□□ -0.49
SKA2-204ENST00000578519 GZMAP12544 262 aa12□□□□□ -0.49
SKA2-204ENST00000578519 MARK3P27448 753 aa12□□□□□ -0.49
SKA2-204ENST00000578519 USP8P40818 1118 aa12□□□□□ -0.49
SKA2-204ENST00000578519 PDE6CP51160 858 aa12□□□□□ -0.49
SKA2-204ENST00000578519 SOX10P56693 466 aa12□□□□□ -0.49
SKA2-204ENST00000578519 HUNKP57058 714 aa12□□□□□ -0.49
SKA2-204ENST00000578519 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
SKA2-204ENST00000578519 APBA1Q02410 837 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ARHGAP1Q07960 439 aa12□□□□□ -0.49
SKA2-204ENST00000578519 BIRC3Q13489 604 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ACVR2BQ13705 512 aa12□□□□□ -0.49
SKA2-204ENST00000578519 RPS6KA1Q15418 735 aa12□□□□□ -0.49
SKA2-204ENST00000578519 DGKDQ16760 1214 aa12□□□□□ -0.49
SKA2-204ENST00000578519 MAP9Q49MG5 647 aa12□□□□□ -0.49
SKA2-204ENST00000578519 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
SKA2-204ENST00000578519 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
SKA2-204ENST00000578519 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
SKA2-204ENST00000578519 SV2AQ7L0J3 742 aa12□□□□□ -0.49
SKA2-204ENST00000578519 FAM71AQ8IYT1 594 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms