RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
GGA3-205ENST00000578348 STK33Q9BYT3 514 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 TMEM206Q9H813 350 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 LRRC4CQ9HCJ2 640 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 FAM114A2Q9NRY5 505 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
GGA3-205ENST00000578348 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 STAM2O75886 525 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 TMEM253P0C7T8 217 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 ZNF211Q13398 564 aaPredicted RBP12.32□□□□□ -0.44
GGA3-205ENST00000578348 ARHGAP44Q17R89 818 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
GGA3-205ENST00000578348 SYCP3Q8IZU3 236 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 TMEM174Q8WUU8 243 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 SEC14L1Q92503 715 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 ARHGEF26Q96DR7 871 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 ACCSQ96QU6 501 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 FMO2Q99518 471 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
GGA3-205ENST00000578348 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 DDX3YO15523 660 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
GGA3-205ENST00000578348 DR1Q01658 176 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 POU5F1Q01860 360 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 QPCTQ16769 361 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 MOV10L1Q9BXT6 1211 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 TAS2R14Q9NYV8 317 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 NCANO14594 1321 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 SBF1O95248 1867 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 LRRN2O75325 713 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 USP2O75604 605 aaPredicted RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 USP8P40818 1118 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 PTENP60484 403 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 PPATQ06203 517 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 INTS2Q9H0H0 1204 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 TTC7AQ9ULT0 858 aaPredicted RBP12.31□□□□□ -0.44
GGA3-205ENST00000578348 NFASCO94856 1347 aa12.31□□□□□ -0.44
GGA3-205ENST00000578348 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 KCNA2P16389 499 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 PLS1Q14651 629 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
GGA3-205ENST00000578348 XKR9Q5GH70 373 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 C6orf89Q6UWU4 347 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 CCDC13Q8IYE1 715 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 GLG1Q92896 1179 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
GGA3-205ENST00000578348 APEX2Q9UBZ4 518 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 COG5Q9UP83 839 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 PCDHA10Q9Y5I2 948 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 GOLGA6L10A0A0M3HER8 536 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 EXOC3O60645 756 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 KRT13P13646 458 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 PSEN1P49768 467 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 NCKAP1LP55160 1127 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 GTF2BQ00403 316 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 MYL7Q01449 175 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 ACTN3Q08043 901 aaPredicted RBP12.3□□□□□ -0.44
GGA3-205ENST00000578348 AADACL2Q6P093 401 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 CCDC121Q6ZUS5 278 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 ATP6V0A1Q93050 837 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 SYT11Q9BT88 431 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 CARD9Q9H257 536 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
GGA3-205ENST00000578348 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
GGA3-205ENST00000578348 ARID2Q68CP9 1835 aa12.29□□□□□ -0.44
GGA3-205ENST00000578348 PPFIA2O75334 1257 aa12.29□□□□□ -0.44
GGA3-205ENST00000578348 LCTP09848 1927 aa12.29□□□□□ -0.44
GGA3-205ENST00000578348 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms