RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TMEM31Q5JXX7 168 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 SYT2Q8N9I0 419 aaPredicted RBP25.32■■□□□ 1.64
VAPA-205ENST00000578314 DRC1Q96MC2 740 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 LRFN3Q9BTN0 628 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 C17orf75Q9HAS0 396 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 PARP2Q9UGN5 583 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 USP20Q9Y2K6 914 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 C5orf42Q9H799 3197 aa25.32■■□□□ 1.64
VAPA-205ENST00000578314 K7ERI5 159 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 CLASP2O75122 1294 aaKnown RBP25.31■■□□□ 1.64
VAPA-205ENST00000578314 LIG1P18858 919 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 SYT1P21579 422 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 PEX3P56589 373 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 SF3A1Q15459 793 aaKnown RBP25.31■■□□□ 1.64
VAPA-205ENST00000578314 TMEM119Q4V9L6 283 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 NT5DC1Q5TFE4 455 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 ANKRD54Q6NXT1 300 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 TMEM134Q9H6X4 195 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 C11orf16Q9NQ32 467 aa25.31■■□□□ 1.64
VAPA-205ENST00000578314 CCDC169A6NNP5 214 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 K7ELQ4 463 aaPredicted RBP25.3■■□□□ 1.64
VAPA-205ENST00000578314 GPR37L1O60883 481 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 EFEMP2O95967 443 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 OR1G1P47890 313 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 TMEM132AQ24JP5 1023 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 CABP7Q86V35 215 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 AUTS2Q8WXX7 1259 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 CDK5RAP3Q96JB5 506 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 PLIN2Q99541 437 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 ADPGKQ9BRR6 497 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 NTPCRQ9BSD7 190 aaKnown RBP25.3■■□□□ 1.64
VAPA-205ENST00000578314 S1PR5Q9H228 398 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 MARCH5Q9NX47 278 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 KCND2Q9NZV8 630 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 KLK14Q9P0G3 267 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 ARHGAP28Q9P2N2 729 aa25.3■■□□□ 1.64
VAPA-205ENST00000578314 RBM19Q9Y4C8 960 aaKnown RBP25.3■■□□□ 1.64
VAPA-205ENST00000578314 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 NR1I2O75469 434 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 PLA2G4BP0C869 781 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 HOXB8P17481 243 aaPredicted RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 LONP1P36776 959 aaKnown RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 SLC12A3P55017 1021 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 GRIK3Q13003 919 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 DMP1Q13316 513 aaPredicted RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 EEF1DP3Q658K8 133 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 LLGL2Q6P1M3 1020 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 SYCE2Q6PIF2 218 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 SUSD6Q92537 303 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 CASP10Q92851 521 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 POP1Q99575 1024 aaKnown RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 KCNG1Q9UIX4 513 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 PRG3Q9Y2Y8 225 aaPredicted RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 USP15Q9Y4E8 981 aaPredicted RBP25.29■■□□□ 1.64
VAPA-205ENST00000578314 HCFC2Q9Y5Z7 792 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 PHLPP2Q6ZVD8 1323 aa25.29■■□□□ 1.64
VAPA-205ENST00000578314 LILRB3O75022 631 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 CA8P35219 290 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 UBA7P41226 1012 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 PTPN14Q15678 1187 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 ATF7IP2Q5U623 682 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 RNF168Q8IYW5 571 aaPredicted RBP25.28■■□□□ 1.64
VAPA-205ENST00000578314 KMT5AQ9NQR1 393 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 SNTG2Q9NY99 539 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 TNFSF13BQ9Y275 285 aa25.28■■□□□ 1.64
VAPA-205ENST00000578314 FAM86C2PA6NEL3 165 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 SOD2P04179 222 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 SSBP05455 408 aaKnown RBP eCLIP25.27■■□□□ 1.64
VAPA-205ENST00000578314 ALADP13716 330 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 GRIN1Q05586 938 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 RESTQ13127 1097 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 DCAF4L1Q3SXM0 396 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 TMEM87AQ8NBN3 555 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 SPIRE2Q8WWL2 714 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 SNX21Q969T3 373 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 CALML4Q96GE6 196 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 COLEC11Q9BWP8 271 aa25.27■■□□□ 1.64
VAPA-205ENST00000578314 SFI1A8K8P3 1242 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 PTPAQ15257 358 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 ARSHQ5FYA8 562 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 TAS1R3Q7RTX0 852 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 APBB1IPQ7Z5R6 666 aaPredicted RBP25.26■■□□□ 1.63
VAPA-205ENST00000578314 SLC22A17Q8WUG5 538 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 RPS6KC1Q96S38 1066 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 ACO2Q99798 780 aaKnown RBP25.26■■□□□ 1.63
VAPA-205ENST00000578314 HERC2P3Q9BVR0 1158 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 PTPRHQ9HD43 1115 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 CLIC4Q9Y696 253 aa25.26■■□□□ 1.63
VAPA-205ENST00000578314 RECQL4O94761 1208 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 PLS3P13797 630 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 TPRNQ4KMQ1 711 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 TAS1R1Q7RTX1 841 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 PPFIBP1Q86W92 1011 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 KLHL5Q96PQ7 755 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 MRPL4Q9BYD3 311 aaKnown RBP25.25■■□□□ 1.63
VAPA-205ENST00000578314 MRPL17Q9NRX2 175 aaKnown RBP25.25■■□□□ 1.63
VAPA-205ENST00000578314 MTMR6Q9Y217 621 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 GTF3C3Q9Y5Q9 886 aa25.25■■□□□ 1.63
VAPA-205ENST00000578314 F8W810 466 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 PTGESO14684 152 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms