RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTC1-203ENST00000578240 FMO5P49326 533 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 CYP24A1Q07973 514 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 TRIM14Q14142 442 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 TCERG1LQ5VWI1 586 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 E4F1Q66K89 784 aaPredicted RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 TSHZ1Q6ZSZ6 1077 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 CDR2LQ86X02 465 aaPredicted RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 CPLX3Q8WVH0 158 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 FAM213AQ9BRX8 229 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 SPC25Q9HBM1 224 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 TOPORSQ9NS56 1045 aaPredicted RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 FAM207AQ9NSI2 230 aaPredicted RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
CTC1-203ENST00000578240 AJAP1Q9UKB5 411 aaPredicted RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 AGO2Q9UKV8 859 aaKnown RBP14.29□□□□□ -0.12
CTC1-203ENST00000578240 TET1Q8NFU7 2136 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 MEFVO15553 781 aaPredicted RBP14.28□□□□□ -0.12
CTC1-203ENST00000578240 EXTL3O43909 919 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 TSPAN1O60635 241 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 LRRN2O75325 713 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 FGFR4P22455 802 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 TNFSF9P41273 254 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 ACOT2P49753 483 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 VAMP7P51809 220 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 MCL1Q07820 350 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 PRPF4BQ13523 1007 aaKnown RBP14.28□□□□□ -0.12
CTC1-203ENST00000578240 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 ZSCAN30Q86W11 494 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 CEP120Q8N960 986 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 NLRP7Q8WX94 980 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 BAP1Q92560 729 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 ZNF333Q96JL9 665 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTC1-203ENST00000578240 CDT1Q9H211 546 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 PDZD7Q9H5P4 517 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
CTC1-203ENST00000578240 PRMT7Q9NVM4 692 aaPredicted RBP14.28□□□□□ -0.12
CTC1-203ENST00000578240 CAPN11Q9UMQ6 739 aa14.28□□□□□ -0.12
CTC1-203ENST00000578240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.28□□□□□ -0.127e-6■■■■□ 21
CTC1-203ENST00000578240 GTPBP10A4D1E9 387 aaKnown RBP14.27□□□□□ -0.12
CTC1-203ENST00000578240 AKR1B15C9JRZ8 316 aaPredicted RBP14.27□□□□□ -0.12
CTC1-203ENST00000578240 ACTN1P12814 892 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 ARF4P18085 180 aaPredicted RBP14.27□□□□□ -0.12
CTC1-203ENST00000578240 SLC9A1P19634 815 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 ACLYP53396 1101 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 NOLC1Q14978 699 aaKnown RBP eCLIP14.27□□□□□ -0.12
CTC1-203ENST00000578240 ATF7IP2Q5U623 682 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 MPZL3Q6UWV2 235 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 SERINC5Q86VE9 423 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 LMO3Q8TAP4 145 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 PRIMPOLQ96LW4 560 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 DNAJC7Q99615 494 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 OSMRQ99650 979 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.12
CTC1-203ENST00000578240 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 ABHD10Q9NUJ1 306 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 GCNT4Q9P109 453 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.12
CTC1-203ENST00000578240 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 ZEB2O60315 1214 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 PON1P27169 355 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 CLDN10P78369 228 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 MYL7Q01449 175 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 MTFR1Q15390 333 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 SLFN12LQ6IEE8 588 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 SRGAP1Q7Z6B7 1085 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 ZBTB33Q86T24 672 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 TMC2Q8TDI7 906 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 CPB2Q96IY4 423 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 PANX2Q96RD6 677 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 TMEM117Q9H0C3 514 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 PAK6Q9NQU5 681 aaPredicted RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 ESPNB1AK53 854 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 CLDN3O15551 220 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 KRT13P13646 458 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 DARSP14868 501 aaKnown RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 HOXA11P31270 313 aaPredicted RBP14.26□□□□□ -0.13
CTC1-203ENST00000578240 KRT9P35527 623 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 GCLMP48507 274 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 PSMD6Q15008 389 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 SNX17Q15036 470 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 ZNF568Q3ZCX4 644 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
CTC1-203ENST00000578240 C15orf39Q6ZRI6 1047 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms