RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 STYXL1Q9Y6J8 313 aa13.56□□□□□ -0.24
RARA-208ENST00000577646 EYSQ5T1H1 3165 aa13.56□□□□□ -0.24
RARA-208ENST00000577646 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 MBD3O95983 291 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 LDHAP00338 332 aaKnown RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 PPP1R2P41236 205 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 GUCD1Q96NT3 240 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 PBX4Q9BYU1 374 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 TTYH1Q9H313 450 aaPredicted RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 ZNF576Q9H609 170 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 SLC28A3Q9HAS3 691 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 RC3H2Q9HBD1 1191 aaKnown RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
RARA-208ENST00000577646 IPPQ9Y573 584 aa13.55□□□□□ -0.24
RARA-208ENST00000577646 UPP2O95045 317 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 GARTP22102 1010 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 GRM5P41594 1212 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
RARA-208ENST00000577646 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 GRAMD1CQ8IYS0 662 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 FIBCD1Q8N539 461 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 SMG8Q8ND04 991 aaKnown RBP13.54□□□□□ -0.24
RARA-208ENST00000577646 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 SMARCE1Q969G3 411 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
RARA-208ENST00000577646 GBP3Q9H0R5 595 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 RSAD1Q9HA92 442 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
RARA-208ENST00000577646 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 A0A0B4J269 797 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 OGTO15294 1046 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 NPTXRO95502 500 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 RB1P06400 928 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 CLTAP09496 248 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 FOSL2P15408 326 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 PBX2P40425 430 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
RARA-208ENST00000577646 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 CD302Q8IX05 232 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 EIF2AQ9BY44 585 aaKnown RBP13.53□□□□□ -0.24
RARA-208ENST00000577646 CDT1Q9H211 546 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 PLEKHA5Q9HAU0 1116 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 STK39Q9UEW8 545 aa13.53□□□□□ -0.24
RARA-208ENST00000577646 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.24
RARA-208ENST00000577646 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 PDXKO00764 312 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 ABLIM1O14639 778 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 OFD1O75665 1012 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 MYBP10242 640 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
RARA-208ENST00000577646 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
RARA-208ENST00000577646 NOMO2Q5JPE7 1267 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 ZNF658Q5TYW1 1059 aaPredicted RBP13.52□□□□□ -0.25
RARA-208ENST00000577646 EEF1DP3Q658K8 133 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 C12orf56Q8IXR9 622 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 LRRC43Q8N309 656 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 MYLIPQ8WY64 445 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 CASD1Q96PB1 797 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 SLC39A2Q9NP94 309 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.25
RARA-208ENST00000577646 CDH23Q9H251 3354 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 PRPF6O94906 941 aaKnown RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 EDN1P05305 212 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 ADRB2P07550 413 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 CASP1P29466 404 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 MCM4P33991 863 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 CASP5P51878 434 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 RABGGTBP53611 331 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 ERVK-21P61565 698 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 STK4Q13043 487 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 PNOCQ13519 176 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 STIM1Q13586 685 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 XKR4Q5GH76 650 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 FAM117BQ6P1L5 589 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 FOXR2Q6PJQ5 311 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms