RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 PFKMP08237 780 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ACRP10323 421 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 STX17P56962 302 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF445P59923 1031 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 LRRC63Q05C16 580 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 MCL1Q07820 350 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 PDE4CQ08493 712 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 PPIGQ13427 754 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■■■■□ 25.5
PRPF8-213ENST00000576407 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF568Q3ZCX4 644 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CT47A1Q5JQC4 288 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 UBXN11Q5T124 520 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 TWF2Q6IBS0 349 aaKnown RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CNKSR3Q6P9H4 555 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 LRSAM1Q6UWE0 723 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 FAM43BQ6ZT52 329 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 RTN4RL1Q86UN2 441 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 C12orf56Q8IXR9 622 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 LINC01599Q8WXQ3 324 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 POMGNT1Q8WZA1 660 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CCDC51Q96ER9 411 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 MED15Q96RN5 788 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 LBHD1Q9BQE6 289 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CBWD1Q9BRT8 395 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 EIF2AQ9BY44 585 aaKnown RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CDT1Q9H211 546 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 IL23AQ9NPF7 189 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
PRPF8-213ENST00000576407 RWDD2AQ9UIY3 292 aa9.33□□□□□ -0.92
PRPF8-213ENST00000576407 ENPP3O14638 875 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 NPTXRO95502 500 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 NR3C1P04150 777 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 MCF2P10911 925 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 GARTP22102 1010 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 EPHB4P54760 987 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 IKBKEQ14164 716 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 NFIL3Q16649 462 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 DCAF4L1Q3SXM0 396 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 FOXR2Q6PJQ5 311 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 APBB1IPQ7Z5R6 666 aaPredicted RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 ZSWIM2Q8NEG5 633 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 TMEM174Q8WUU8 243 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 TSG101Q99816 390 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 MSTO1Q9BUK6 570 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 TRIM6Q9C030 488 aaPredicted RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 PCIF1Q9H4Z3 704 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 GRPEL1Q9HAV7 217 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 RGS18Q9NS28 235 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 FAM105AQ9NUU6 356 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 HSPBP1Q9NZL4 362 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 AGO2Q9UKV8 859 aaKnown RBP9.32□□□□□ -0.92
PRPF8-213ENST00000576407 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 TET1Q8NFU7 2136 aa9.32□□□□□ -0.92
PRPF8-213ENST00000576407 A0A0U1RQF3 1178 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ABHD14A-ACY1A0A1B0GW23 586 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 GOLGA8IPA6NC78 632 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 GOLGA8JA6NMD2 632 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 C9IYK1 514 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 KIAA0391O15091 583 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 OGTO15294 1046 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 EXTL3O43909 919 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 FAM189A1O60320 539 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 EXOC3O60645 756 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF623O75123 536 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 FGBP02675 491 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ACTN1P12814 892 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 NR2F2P24468 414 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 RPL13P26373 211 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 TNFSF9P41273 254 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF165P49910 485 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 RAB27AP51159 221 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 CYP2J2P51589 502 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 OSTNP61366 133 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 FAM189BP81408 668 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 FKBP3Q00688 224 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ADAM9Q13443 819 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 MYBPC2Q14324 1141 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 SEZ6Q53EL9 994 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ZBTB41Q5SVQ8 909 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 LRRC55Q6ZSA7 311 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 SLC24A5Q71RS6 500 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms