RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZNF202O95125 648 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 LETM1O95202 739 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-215ENST00000576033 GCNT3O95395 438 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 POMCP01189 267 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 TNFSF9P41273 254 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SCNN1GP51170 649 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 WNT7BP56706 349 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 FAM189BP81408 668 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 POU5F1BQ06416 359 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SPAG1Q07617 926 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 EHHADHQ08426 723 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 BTG3Q14201 252 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-215ENST00000576033 ADGRE1Q14246 886 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 PPP2R5AQ15172 486 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 FAM187BQ17R55 369 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF568Q3ZCX4 644 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 KRBA2Q6ZNG9 492 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF280BQ86YH2 543 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 NELFCDQ8IXH7 590 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SMYD4Q8IYR2 804 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-215ENST00000576033 DEFB123Q8N688 67 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 IQUBQ8NA54 791 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 KIAA0895Q8NCT3 520 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 GAD1Q99259 594 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 RAD9AQ99638 391 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 C7orf25Q9BPX7 421 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 C2orf40Q9H1Z8 148 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SEMA6BQ9H3T3 888 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 CWH43Q9H720 699 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 MRPL44Q9H9J2 332 aaKnown RBP8.68□□□□□ -1.02
CCDC40-215ENST00000576033 GRPEL1Q9HAV7 217 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 PTPRHQ9HD43 1115 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 C1orf112Q9NSG2 853 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM161AQ9NX61 479 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 KCND2Q9NZV8 630 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 MSRAQ9UJ68 235 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 LRFN2Q9ULH4 789 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 TBX20Q9UMR3 447 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 PCDHB7Q9Y5E2 793 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 SYCE3A1L190 88 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 VWA8A3KMH1 1905 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 PTGESO14684 152 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 FAM189A1O60320 539 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 LPXNO60711 386 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 OFD1O75665 1012 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 DDHD2O94830 711 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 PROZP22891 400 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 DNAJB1P25685 340 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 CTNNB1P35222 781 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 TSC2P49815 1807 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 DPYDQ12882 1025 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 MYO9BQ13459 2157 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 RAB30Q15771 203 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 HERC4Q5GLZ8 1057 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF697Q5TEC3 545 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 ISM2Q6H9L7 571 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 MAP4K3Q8IVH8 894 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 CEP57L1Q8IYX8 460 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 CNNM3Q8NE01 707 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 GSTCDQ8NEC7 633 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 BICD1Q96G01 975 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 PAAF1Q9BRP4 392 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 TIPINQ9BVW5 301 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 STRA6Q9BX79 667 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 MRPL4Q9BYD3 311 aaKnown RBP8.67□□□□□ -1.02
CCDC40-215ENST00000576033 CLSTN2Q9H4D0 955 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 GOLGA2P5Q9HBQ8 144 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 SLC39A2Q9NP94 309 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 CHST12Q9NRB3 414 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 TYW1Q9NV66 732 aaKnown RBP8.67□□□□□ -1.02
CCDC40-215ENST00000576033 TBC1D13Q9NVG8 400 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 INSL6Q9Y581 213 aa8.67□□□□□ -1.02
CCDC40-215ENST00000576033 MYO7AQ13402 2215 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 PRRC2BQ5JSZ5 2229 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GOLGA8IPA6NC78 632 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GOLGA8JA6NMD2 632 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 HNRNPDLO14979 420 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 N4BP3O15049 544 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GRM6O15303 877 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ZC3H11AO75152 810 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 RPN1P04843 607 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CXCL8P10145 99 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ITGA4P13612 1032 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ADSSP30520 456 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GUCY2FP51841 1108 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 EFNA5P52803 228 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 BCAR1P56945 870 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GTF2BQ00403 316 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CDC42EP1Q00587 391 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms