RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 TSPAN1O60635 241 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 DKC1O60832 514 aaKnown RBP eCLIP11.13□□□□□ -0.633e-6■■■■■ 27.9
CALCOCO2-227ENST00000575560 NR1I2O75469 434 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZMYND10O75800 440 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 P4HBP07237 508 aaKnown RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 PDIA3P30101 505 aaKnown RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 AXLP30530 894 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 MLH1P40692 756 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 RFC5P40937 340 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 SCNN1GP51170 649 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 PARM1Q6UWI2 310 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 GET4Q7L5D6 327 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 FERMT3Q86UX7 667 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 C4orf19Q8IY42 314 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 RNF149Q8NC42 400 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 TCP11Q8WWU5 503 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 FGF14Q92915 247 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 B3GALT6Q96L58 329 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 COLEC11Q9BWP8 271 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 FBXO4Q9UKT5 387 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 HES2Q9Y543 173 aa11.13□□□□□ -0.63
CALCOCO2-227ENST00000575560 KANSL1LA0AUZ9 987 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 SLC37A4O43826 429 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 ERLIN2O94905 339 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 FSHRP23945 695 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 PTENP60484 403 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 AMHR2Q16671 573 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 RSPO4Q2I0M5 234 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 FUT10Q6P4F1 479 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 NOTUMQ6P988 496 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 CSRNP2Q9H175 543 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 KCNMB3Q9NPA1 279 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 ADAM28Q9UKQ2 775 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 CDH7Q9ULB5 785 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 SNX14Q9Y5W7 946 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZFHX4Q86UP3 3567 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 CACNA1BQ00975 2339 aa11.12□□□□□ -0.63
CALCOCO2-227ENST00000575560 MTCL1Q9Y4B5 1905 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZBTB39O15060 712 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 RPL17P18621 184 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 RPS6KB1P23443 525 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 CREMQ03060 361 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 PRKCQQ04759 706 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 NCBP1Q09161 790 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 MXD4Q14582 209 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 EMC2Q15006 297 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 PPP4R3AQ6IN85 833 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 GALNT17Q6IS24 598 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 GRASPQ7Z6J2 395 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 GLYCTKQ8IVS8 523 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 FAM177A1Q8N128 213 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 CPB2Q96IY4 423 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 NXF3Q9H4D5 531 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 MTF2Q9Y483 593 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-227ENST00000575560 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 SPTLC1O15269 473 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 DEXIO95424 95 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 ARF4P18085 180 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 SDHBP21912 280 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 AKAP5P24588 427 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 HSPA4P34932 840 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 IRX6P78412 446 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 NTHL1P78549 312 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 MBTD1Q05BQ5 628 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 EPHA7Q15375 998 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 INF2Q27J81 1249 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 XKR9Q5GH70 373 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 RTP2Q5QGT7 225 aa11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 PRSS55Q6UWB4 352 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 RSPO2Q6UXX9 243 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-227ENST00000575560 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms