RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 ITM2CQ9NQX7 267 aa5.75□□□□□ -1.49
TSR1-203ENST00000575049 SH3GLB2Q9NR46 395 aa5.75□□□□□ -1.49
TSR1-203ENST00000575049 ZNF277Q9NRM2 450 aaPredicted RBP5.75□□□□□ -1.49
TSR1-203ENST00000575049 IFT80Q9P2H3 777 aaPredicted RBP5.75□□□□□ -1.49
TSR1-203ENST00000575049 MYOTQ9UBF9 498 aa5.75□□□□□ -1.49
TSR1-203ENST00000575049 SERPINB13Q9UIV8 391 aa5.75□□□□□ -1.49
TSR1-203ENST00000575049 TCRBV5S2A0A599 114 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 CCDC66A2RUB6 948 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 RHPN2P1A8MT19 583 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 EIF3FO00303 357 aaPredicted RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 WNT9AO14904 365 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 KPNA5O15131 536 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 CSTBP04080 98 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 LSP1P33241 339 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 ADD2P35612 726 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 DNM2P50570 870 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 AGFG1P52594 562 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 FOXO4P98177 505 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 CACNB2Q08289 660 aaPredicted RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 CNN3Q15417 329 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 ZNF385BQ569K4 471 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 HABP4Q5JVS0 413 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 SWSAP1Q6NVH7 229 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 CNKSR3Q6P9H4 555 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 FASTKD5Q7L8L6 764 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 OTOP1Q7RTM1 612 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 B3GNT8Q7Z7M8 397 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 FAM126BQ8IXS8 530 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 C2orf69Q8N8R5 385 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 ZNF610Q8N9Z0 462 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 ARRDC4Q8NCT1 418 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 SLC30A5Q8TAD4 765 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 PHOSPHO1Q8TCT1 267 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 PANK1Q8TE04 598 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 SSH1Q8WYL5 1049 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 LRTOMTQ8WZ04 291 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 PAWRQ96IZ0 340 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 BARD1Q99728 777 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 DNAJC28Q9NX36 388 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 CWC25Q9NXE8 425 aaPredicted RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 GPR45Q9Y5Y3 372 aa5.74□□□□□ -1.49
TSR1-203ENST00000575049 RRBP1Q9P2E9 1410 aaKnown RBP5.74□□□□□ -1.49
TSR1-203ENST00000575049 CAPN8A6NHC0 703 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ADAMTS3O15072 1205 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 NKRFO15226 690 aaKnown RBP eCLIP5.73□□□□□ -1.49
TSR1-203ENST00000575049 NUAK1O60285 661 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 MGEA5O60502 916 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 PLOD3O60568 738 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 NDUFS2O75306 463 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ALDH2P05091 517 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 C8BP07358 591 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 CFPP27918 469 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 HTR1BP28222 390 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 POLD1P28340 1107 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ELF1P32519 619 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 TECP42680 631 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 MTNR1BP49286 362 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 KIF23Q02241 960 aaPredicted RBP5.73□□□□□ -1.49
TSR1-203ENST00000575049 CCDC92Q53HC0 331 aaPredicted RBP5.73□□□□□ -1.49
TSR1-203ENST00000575049 CIAPIN1Q6FI81 312 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 PGBD2Q6P3X8 592 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 C1QL4Q86Z23 238 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 LRRC56Q8IYG6 542 aaPredicted RBP5.73□□□□□ -1.49
TSR1-203ENST00000575049 COLGALT2Q8IYK4 626 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 LSMEM1Q8N8F7 131 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 SMARCC2Q8TAQ2 1214 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 UHMK1Q8TAS1 419 aaKnown RBP5.73□□□□□ -1.49
TSR1-203ENST00000575049 FBXW5Q969U6 566 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 TMEM41AQ96HV5 264 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 RSRC1Q96IZ7 334 aaKnown RBP5.73□□□□□ -1.49
TSR1-203ENST00000575049 TTLL2Q9BWV7 592 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 AP1M1Q9BXS5 423 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 PLEKHA5Q9HAU0 1116 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 VPS45Q9NRW7 570 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ANKEF1Q9NU02 776 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ARHGAP28Q9P2N2 729 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 ASH2LQ9UBL3 628 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 KCNG1Q9UIX4 513 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 TUBD1Q9UJT1 453 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 TMEM98Q9Y2Y6 226 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 PCDHGB2Q9Y5G2 931 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 SPO11Q9Y5K1 396 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 SMARCA4P51532 1647 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 FANCIQ9NVI1 1328 aa5.73□□□□□ -1.49
TSR1-203ENST00000575049 LCHNA4D1U4 455 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 B4E171 279 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 H7C1D1 291 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 SLC27A2O14975 620 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 DDX58O95786 925 aaKnown RBP5.72□□□□□ -1.49
TSR1-203ENST00000575049 HSP90AB1P08238 724 aaKnown RBP5.72□□□□□ -1.49
TSR1-203ENST00000575049 GLULP15104 373 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 SLC9A1P19634 815 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 RPS6KB1P23443 525 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 TSPAN7P41732 249 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 STAT5AP42229 794 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 MAPK10P53779 464 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 ARL4CP56559 192 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 JAG1P78504 1218 aa5.72□□□□□ -1.49
TSR1-203ENST00000575049 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
TSR1-203ENST00000575049 PGS1Q32NB8 556 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms