RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 COLEC11Q9BWP8 271 aa16.88■□□□□ 0.29
CTNS-209ENST00000574776 KMT2EQ8IZD2 1858 aa16.88■□□□□ 0.29
CTNS-209ENST00000574776 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 LRRIQ4A6NIV6 560 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 MED24O75448 989 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 EFEMP2O95967 443 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 SPATA31D3P0C874 917 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 GLUD2P49448 558 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTNS-209ENST00000574776 ZNF174Q15697 407 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 SLC27A1Q6PCB7 646 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 SPATA31D4Q6ZUB0 917 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 HACE1Q8IYU2 909 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 RABGGTAQ92696 567 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 TUFT1Q9NNX1 390 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 MAN1C1Q9NR34 630 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 PARP2Q9UGN5 583 aa16.87■□□□□ 0.29
CTNS-209ENST00000574776 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
CTNS-209ENST00000574776 CCDC195A0A1B0GUA6 201 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 ADH1AP07327 375 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 CCDC149Q6ZUS6 474 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 OTOP3Q7RTS5 596 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 PALB2Q86YC2 1186 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
CTNS-209ENST00000574776 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 GPR62Q9BZJ7 368 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 RXFP1Q9HBX9 757 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 FAM86C1Q9NVL1 165 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 CACNA1HO95180 2353 aa16.86■□□□□ 0.29
CTNS-209ENST00000574776 DSG1Q02413 1049 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 C15orf39Q6ZRI6 1047 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 CCDC83Q8IWF9 413 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 MCPH1Q8NEM0 835 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 ATOH1Q92858 354 aaPredicted RBP16.85■□□□□ 0.29
CTNS-209ENST00000574776 C8orf76Q96K31 380 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
CTNS-209ENST00000574776 FZD8Q9H461 694 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 CHST7Q9NS84 486 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 C2orf16Q68DN1 1984 aa16.85■□□□□ 0.29
CTNS-209ENST00000574776 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 H0Y858 1186 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
CTNS-209ENST00000574776 TADA2AO75478 443 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 RFPL2O75678 378 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 GLUD1P00367 558 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 POTEGQ6S5H5 508 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 GLYCTKQ8IVS8 523 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 CMASQ8NFW8 434 aaPredicted RBP16.84■□□□□ 0.29
CTNS-209ENST00000574776 KCNK12Q9HB15 430 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 POLD4Q9HCU8 107 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 PRMT7Q9NVM4 692 aaPredicted RBP16.84■□□□□ 0.29
CTNS-209ENST00000574776 CACNG4Q9UBN1 327 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 ADAM28Q9UKQ2 775 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 USP20Q9Y2K6 914 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 PLXNA3P51805 1871 aa16.84■□□□□ 0.29
CTNS-209ENST00000574776 CYP11B2P19099 503 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 RPA1P27694 616 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 GRIK3Q13003 919 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 TDGQ13569 410 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
CTNS-209ENST00000574776 ELMSAN1Q6PJG2 1045 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 PADI6Q6TGC4 694 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 TMEM105Q8N8V8 129 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 ERMNQ8TAM6 284 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 RIN2Q8WYP3 895 aaPredicted RBP16.83■□□□□ 0.28
CTNS-209ENST00000574776 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 PRIMPOLQ96LW4 560 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 ZFHX2Q9C0A1 2572 aaPredicted RBP16.83■□□□□ 0.28
CTNS-209ENST00000574776 IRF2BPLQ9H1B7 796 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 MFSD1Q9H3U5 465 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 DPP7Q9UHL4 492 aa16.83■□□□□ 0.28
CTNS-209ENST00000574776 DENND4AQ7Z401 1863 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 ARHGEF35A5YM69 484 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 TGM5O43548 720 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 N4BP1O75113 896 aaKnown RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 OR52Z1P0C646 297 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 RPL17P18621 184 aaKnown RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 LIG1P18858 919 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 GBP2P32456 591 aaPredicted RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 NUBP1P53384 320 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 FAM187BQ17R55 369 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 TMEM132AQ24JP5 1023 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 ASTLQ6HA08 431 aaPredicted RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 SMG7Q92540 1137 aaKnown RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 LLPHQ9BRT6 129 aaKnown RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 CXCL16Q9H2A7 254 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 PDZD7Q9H5P4 517 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
CTNS-209ENST00000574776 SNTG2Q9NY99 539 aa16.82■□□□□ 0.28
CTNS-209ENST00000574776 N4BP3O15049 544 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms