RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 FSHRP23945 695 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 RFC5P40937 340 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 NTHL1P78549 312 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 SNW1Q13573 536 aaKnown RBP19.55■□□□□ 0.72
CCDC40-211ENST00000574099 PARM1Q6UWI2 310 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 GRASPQ7Z6J2 395 aaPredicted RBP19.55■□□□□ 0.72
CCDC40-211ENST00000574099 FERMT3Q86UX7 667 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 MBOAT7Q96N66 472 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 COLEC11Q9BWP8 271 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 NXF3Q9H4D5 531 aaKnown RBP19.55■□□□□ 0.72
CCDC40-211ENST00000574099 SPATA6Q9NWH7 488 aaPredicted RBP19.55■□□□□ 0.72
CCDC40-211ENST00000574099 NCDNQ9UBB6 729 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 CACNG4Q9UBN1 327 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
CCDC40-211ENST00000574099 ZMYND10O75800 440 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 PAPLNO95428 1278 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 STARD6P59095 220 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 UBXN2BQ14CS0 331 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 INF2Q27J81 1249 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 USP41Q3LFD5 358 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 BMP2KLQ5H9B9 411 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 NOTUMQ6P988 496 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 PRSS55Q6UWB4 352 aaPredicted RBP19.54■□□□□ 0.72
CCDC40-211ENST00000574099 CNTNAP3BQ96NU0 1288 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 CNTNAP3Q9BZ76 1288 aa19.54■□□□□ 0.72
CCDC40-211ENST00000574099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCDC40-211ENST00000574099 INO80B-WBP1J3KQ70 363 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 DKC1O60832 514 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC40-211ENST00000574099 KRT37O76014 449 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 AKAP5P24588 427 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
CCDC40-211ENST00000574099 PPP2R5CQ13362 524 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 LILRA6Q6PI73 481 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 MOXD1Q6UVY6 613 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 TRIM22Q8IYM9 498 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 TCP11Q8WWU5 503 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 SHDQ96IW2 340 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 MTRQ99707 1265 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 LXNQ9BS40 222 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 TRIM6Q9C030 488 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-211ENST00000574099 CSRNP2Q9H175 543 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 KLK14Q9P0G3 267 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 FNIP2Q9P278 1114 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 ADAM28Q9UKQ2 775 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 MTF2Q9Y483 593 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-211ENST00000574099 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
CCDC40-211ENST00000574099 KANSL1LA0AUZ9 987 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 M0R2N6 131 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 LAMTOR5O43504 91 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 P4HBP07237 508 aaKnown RBP19.52■□□□□ 0.72
CCDC40-211ENST00000574099 RPS6KB1P23443 525 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.72
CCDC40-211ENST00000574099 MLF2Q15773 248 aaPredicted RBP19.52■□□□□ 0.72
CCDC40-211ENST00000574099 XKR9Q5GH70 373 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 CDR2LQ86X02 465 aaPredicted RBP19.52■□□□□ 0.72
CCDC40-211ENST00000574099 EXOC8Q8IYI6 725 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 HASPINQ8TF76 798 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 AIFM3Q96NN9 605 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 BCO2Q9BYV7 579 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 RGL1Q9NZL6 768 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 CDH7Q9ULB5 785 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
CCDC40-211ENST00000574099 ZBTB39O15060 712 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 CD72P21854 359 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 AXLP30530 894 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 PTENP60484 403 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 CYP4A11Q02928 519 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 CSTF1Q05048 431 aaKnown RBP19.51■□□□□ 0.71
CCDC40-211ENST00000574099 SSRP1Q08945 709 aaKnown RBP19.51■□□□□ 0.71
CCDC40-211ENST00000574099 NPY5RQ15761 445 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 RTP2Q5QGT7 225 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 VARS2Q5ST30 1063 aaKnown RBP19.51■□□□□ 0.71
CCDC40-211ENST00000574099 NCAPH2Q6IBW4 605 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 CCDC51Q96ER9 411 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 AGXT2Q9BYV1 514 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 FBXW11Q9UKB1 542 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 GIT1Q9Y2X7 761 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 PPME1Q9Y570 386 aa19.51■□□□□ 0.71
CCDC40-211ENST00000574099 ZFP37Q9Y6Q3 630 aaPredicted RBP19.51■□□□□ 0.71
CCDC40-211ENST00000574099 GPR179Q6PRD1 2367 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 CACNA1BQ00975 2339 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 CCL16O15467 120 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 ASAP2O43150 1006 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 CDC45O75419 566 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 TADA2AO75478 443 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 NPTXRO95502 500 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 ARF4P18085 180 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-211ENST00000574099 CREMQ03060 361 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
CCDC40-211ENST00000574099 CTTNQ14247 550 aaKnown RBP19.5■□□□□ 0.71
CCDC40-211ENST00000574099 LIN9Q5TKA1 542 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 C4orf19Q8IY42 314 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 HACE1Q8IYU2 909 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 DAGLBQ8NCG7 672 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 GSTCDQ8NEC7 633 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 FGF13Q92913 245 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 DYDC2Q96IM9 177 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 KXD1Q9BQD3 176 aa19.5■□□□□ 0.71
CCDC40-211ENST00000574099 PAAF1Q9BRP4 392 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms