RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CTC1Q2NKJ3 1217 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 PLPP4Q5VZY2 271 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 SLC27A1Q6PCB7 646 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TMC7Q7Z402 723 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 CDR2LQ86X02 465 aaPredicted RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 HACE1Q8IYU2 909 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 SLC39A11Q8N1S5 342 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 SMG8Q8ND04 991 aaKnown RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 BSNDQ8WZ55 320 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 KIFAP3Q92845 792 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 CDK5RAP3Q96JB5 506 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 PRIMPOLQ96LW4 560 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NECAB3Q96P71 396 aaPredicted RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 FAM193BQ96PV7 902 aaPredicted RBP10.02□□□□□ -0.81
NDE1-207ENST00000573203 TCF25Q9BQ70 676 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 APOL6Q9BWW8 343 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NT5C3AQ9H0P0 336 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NRDE2Q9H7Z3 1164 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TLE6Q9H808 572 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 POLD4Q9HCU8 107 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 KANSL3Q9P2N6 904 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 MTMR6Q9Y217 621 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 IPPQ9Y573 584 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TTC28Q96AY4 2481 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 FSCN2O14926 492 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 N4BP3O15049 544 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 PER2O15055 1255 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 LINC01565O15544 149 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 NPTXRO95502 500 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 F13A1P00488 732 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 POMCP01189 267 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 SSBP05455 408 aaKnown RBP eCLIP10.01□□□□□ -0.81
NDE1-207ENST00000573203 GALTP07902 379 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 CA8P35219 290 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 LTBRP36941 435 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 ADAM15Q13444 863 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 PRPF4BQ13523 1007 aaKnown RBP10.01□□□□□ -0.81
NDE1-207ENST00000573203 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
NDE1-207ENST00000573203 SF3A1Q15459 793 aaKnown RBP10.01□□□□□ -0.81
NDE1-207ENST00000573203 CLUL1Q15846 466 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 MAPK6Q16659 721 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 FAM187BQ17R55 369 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 ATL3Q6DD88 541 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 CABP7Q86V35 215 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 EFHBQ8N7U6 833 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 PLIN2Q99541 437 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 KIFC3Q9BVG8 833 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 FZD8Q9H461 694 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 NGRNQ9NPE2 291 aaKnown RBP10.01□□□□□ -0.81
NDE1-207ENST00000573203 PARP2Q9UGN5 583 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 FAM50BQ9Y247 325 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 GIT1Q9Y2X7 761 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 HES2Q9Y543 173 aa10.01□□□□□ -0.81
NDE1-207ENST00000573203 NCOR1O75376 2440 aa10□□□□□ -0.81
NDE1-207ENST00000573203 A0A1B0GUA9 196 aa10□□□□□ -0.81
NDE1-207ENST00000573203 FSD2A1L4K1 749 aa10□□□□□ -0.81
NDE1-207ENST00000573203 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
NDE1-207ENST00000573203 ARL5CA6NH57 179 aa10□□□□□ -0.81
NDE1-207ENST00000573203 CCDC169A6NNP5 214 aa10□□□□□ -0.81
NDE1-207ENST00000573203 ACKR2O00590 384 aa10□□□□□ -0.81
NDE1-207ENST00000573203 HIP1RO75146 1068 aa10□□□□□ -0.81
NDE1-207ENST00000573203 DDHD2O94830 711 aa10□□□□□ -0.81
NDE1-207ENST00000573203 MBD3O95983 291 aa10□□□□□ -0.81
NDE1-207ENST00000573203 ALDH2P05091 517 aa10□□□□□ -0.81
NDE1-207ENST00000573203 AKAP5P24588 427 aa10□□□□□ -0.81
NDE1-207ENST00000573203 MLH1P40692 756 aa10□□□□□ -0.81
NDE1-207ENST00000573203 UBA7P41226 1012 aa10□□□□□ -0.81
NDE1-207ENST00000573203 SLC11A1P49279 550 aa10□□□□□ -0.81
NDE1-207ENST00000573203 AFF1P51825 1210 aaKnown RBP10□□□□□ -0.81
NDE1-207ENST00000573203 EFNA5P52803 228 aa10□□□□□ -0.81
NDE1-207ENST00000573203 PEX3P56589 373 aa10□□□□□ -0.81
NDE1-207ENST00000573203 DLX2Q07687 328 aaPredicted RBP10□□□□□ -0.81
NDE1-207ENST00000573203 DMP1Q13316 513 aaPredicted RBP10□□□□□ -0.81
NDE1-207ENST00000573203 SMC1AQ14683 1233 aaKnown RBP10□□□□□ -0.81
NDE1-207ENST00000573203 DUSP6Q16828 381 aa10□□□□□ -0.81
NDE1-207ENST00000573203 HYIQ5T013 277 aa10□□□□□ -0.81
NDE1-207ENST00000573203 DMRTA1Q5VZB9 504 aa10□□□□□ -0.81
NDE1-207ENST00000573203 RINT1Q6NUQ1 792 aa10□□□□□ -0.81
NDE1-207ENST00000573203 ZNF280BQ86YH2 543 aa10□□□□□ -0.81
NDE1-207ENST00000573203 KCTD17Q8N5Z5 321 aa10□□□□□ -0.81
NDE1-207ENST00000573203 CALML4Q96GE6 196 aa10□□□□□ -0.81
NDE1-207ENST00000573203 IGSF21Q96ID5 467 aa10□□□□□ -0.81
NDE1-207ENST00000573203 AK8Q96MA6 479 aa10□□□□□ -0.81
NDE1-207ENST00000573203 DRC1Q96MC2 740 aa10□□□□□ -0.81
NDE1-207ENST00000573203 PNMA5Q96PV4 448 aa10□□□□□ -0.81
NDE1-207ENST00000573203 GAD1Q99259 594 aa10□□□□□ -0.81
NDE1-207ENST00000573203 CDCA3Q99618 268 aaPredicted RBP10□□□□□ -0.81
NDE1-207ENST00000573203 ADPGKQ9BRR6 497 aa10□□□□□ -0.81
NDE1-207ENST00000573203 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
NDE1-207ENST00000573203 TIPINQ9BVW5 301 aa10□□□□□ -0.81
NDE1-207ENST00000573203 CCDC113Q9H0I3 377 aa10□□□□□ -0.81
NDE1-207ENST00000573203 NXF3Q9H4D5 531 aaKnown RBP10□□□□□ -0.81
NDE1-207ENST00000573203 ZSCAN16Q9H4T2 348 aaPredicted RBP10□□□□□ -0.81
NDE1-207ENST00000573203 DNAJB4Q9UDY4 337 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms