RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-204	ENST00000573018	APBA1	Q02410	837 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	NHLH1	Q02575	133 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	EFCAB12	Q6NXP0	572 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZNF366	Q8N895	744 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	CDYL2	Q8N8U2	506 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZSWIM2	Q8NEG5	633 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	SLC9A6	Q92581	669 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018		Q96MF0	132 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	NEU1	Q99519	415 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	DNAJC7	Q99615	494 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	B4GALT6	Q9UBX8	382 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	MAST3	O60307	1309 aa		4.61	□□□□□ -1.67
ERCC4-204	ENST00000573018	OPA1	O60313	960 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	C1QL1	O75973	258 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	CDKL5	O76039	1030 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	CLEC2L	P0C7M8	214 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	FDXR	P22570	491 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZNF81	P51508	661 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	MGAT5	Q09328	741 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	SCAP	Q12770	1279 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZNF169	Q14929	603 aa	Predicted RBP	4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	CREB3L3	Q68CJ9	461 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	TFAP2C	Q92754	450 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	PHACTR3	Q96KR7	559 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZNF778	Q96MU6	729 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	CLUHP3	Q96NS8	147 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	MTFR1L	Q9H019	292 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZMAT4	Q9H898	229 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	SEMA4G	Q9NTN9	838 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	SNTG2	Q9NY99	539 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	SPO11	Q9Y5K1	396 aa		4.6	□□□□□ -1.67
ERCC4-204	ENST00000573018	SEC24D	O94855	1032 aa	Predicted RBP	4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	FOS	P01100	380 aa	Predicted RBP	4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	MGAT1	P26572	445 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	MXRA7	P84157	204 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	ZBTB41	Q5SVQ8	909 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	METRNL	Q641Q3	311 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	GPR149	Q86SP6	731 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	C9orf106	Q8NAJ2	232 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	ANKS1A	Q92625	1134 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	CDC5L	Q99459	802 aa	Known RBP	4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	OXSM	Q9NWU1	459 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	PTCH2	Q9Y6C5	1203 aa		4.59	□□□□□ -1.67
ERCC4-204	ENST00000573018	ST20-MTHFS	A0A0A6YYL1	179 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	CCDC163	A0A0D9SF12	145 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	TBKBP1	A7MCY6	615 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018		B5MCH6	92 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	DNAJC8	O75937	253 aa	Predicted RBP	4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	ASL	P04424	464 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	RARRES1	P49788	294 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	SRSF4	Q08170	494 aa	Known RBP	4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	SERINC3	Q13530	473 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	UBE3C	Q15386	1083 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	LMBR1L	Q6UX01	489 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018		Q6ZNX1	250 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	GAB3	Q8WWW8	586 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	DNAJC2	Q99543	621 aa	Known RBP	4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018	KLK15	Q9H2R5	256 aa		4.58	□□□□□ -1.68
ERCC4-204	ENST00000573018		A0A1W2PR48	441 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	CBX4	O00257	560 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	IKBKB	O14920	756 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	PLD2	O14939	933 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	PRAMEF4	O60810	478 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	CFI	P05156	583 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	XPA	P23025	273 aa	Predicted RBP	4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	CHN2	P52757	468 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	KRTAP10-7	P60409	375 aa	Predicted RBP	4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	ZZZ3	Q8IYH5	903 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	SH2D3C	Q8N5H7	860 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	MDM1	Q8TC05	714 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	CEP95	Q96GE4	821 aa		4.57	□□□□□ -1.68
ERCC4-204	ENST00000573018	CGB1	A6NKQ9	187 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	PFKM	P08237	780 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	ELANE	P08246	267 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	JMJD7	P0C870	316 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	CD40	P25942	277 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	CACNA2D1	P54289	1103 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	BMT2	Q1RMZ1	405 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	C1QL2	Q7Z5L3	287 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	PMFBP1	Q8TBY8	1022 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	SRPK1	Q96SB4	655 aa	Known RBP	4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	ALOXE3	Q9BYJ1	711 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	IL17RB	Q9NRM6	502 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	ASB6	Q9NWX5	421 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	FOXJ2	Q9P0K8	574 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	MSRA	Q9UJ68	235 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	ATP11B	Q9Y2G3	1177 aa		4.56	□□□□□ -1.68
ERCC4-204	ENST00000573018	WDR91	A4D1P6	747 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	LCHN	A4D1U4	455 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	DRGX	A6NNA5	263 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	NRP2	O60462	931 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	ITGA10	O75578	1167 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	ATP2A2	P16615	1042 aa	Known RBP	4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	NRG3	P56975	720 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	SPDYE7P	Q495Y7	208 aa		4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC4-204	ENST00000573018	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms