RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 BTF3P20290 206 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CD247P20963 164 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CCNCP24863 283 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CTSSP25774 331 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 HOXD10P28358 340 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT2P35908 639 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ECI1P42126 302 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PSMC4P43686 418 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CEBPAP49715 358 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CCR9P51686 369 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 FOXO4P98177 505 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CREB5Q02930 508 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PLAURQ03405 335 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 LRMPQ12912 555 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 INPP5AQ14642 412 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 RABEP1Q15276 862 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 TOR2AQ5JU69 321 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 DCAF15Q66K64 600 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CEP68Q76N32 757 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT25Q7Z3Z0 450 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CHD1LQ86WJ1 897 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PHACTR4Q8IZ21 702 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 KCTD6Q8NC69 237 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ANKRD20A12PQ8NF67 263 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PCDH19Q8TAB3 1148 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 STT3BQ8TCJ2 826 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PIGOQ8TEQ8 1089 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 SMCR8Q8TEV9 937 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 BSNDQ8WZ55 320 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 BRF1Q92994 677 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CALML4Q96GE6 196 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 VPS39Q96JC1 886 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ALPK1Q96QP1 1244 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 DDX23Q9BUQ8 820 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 TEX13BQ9BXU2 312 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 BRD7Q9NPI1 651 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 TM7SF3Q9NS93 570 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF624Q9P2J8 865 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 MORF4L1Q9UBU8 362 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CGGBP1Q9UFW8 167 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 FEM1BQ9UK73 627 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 TRIM17Q9Y577 477 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 A0A0B4J203 849 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 LCHNA4D1U4 455 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FAM181BA6NEQ2 426 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ISM1B1AKI9 464 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 WNT7AO00755 349 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 UBE2CO00762 179 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ARHGAP6O43182 974 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 KDM1AO60341 852 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FMO6PO60774 539 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CLASP2O75122 1294 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 TSC22D2O75157 780 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 SOCS5O75159 536 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 PPFIA2O75334 1257 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 STAM2O75886 525 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FAM155BO75949 473 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CSH1P0DML2 217 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CSH2P0DML3 217 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 NEFHP12036 1026 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 OSMP13725 252 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 MTHFD2P13995 350 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 TFEBP19484 476 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 RGS2P41220 211 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC5A3P53794 718 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CHRNDQ07001 517 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 KLHL30Q0D2K2 578 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF174Q15697 407 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF674Q2M3X9 581 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CTXN3Q4LDR2 81 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FLYWCH1Q4VC44 716 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FAM26FQ5R3K3 315 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ATPAF1Q5TC12 328 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 SNX30Q5VWJ9 437 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 INTS5Q6P9B9 1019 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FIP1L1Q6UN15 594 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CYFIP1Q7L576 1253 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 OTOP1Q7RTM1 612 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 TMEM110Q86TL2 294 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 NOSTRINQ8IVI9 506 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 THNSL1Q8IYQ7 743 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 MARCH10Q8NA82 808 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ATP11CQ8NB49 1132 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 IPMKQ8NFU5 416 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 OR52K2Q8NGK3 314 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CTCFLQ8NI51 663 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FAM71BQ8TC56 605 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 TBC1D22AQ8WUA7 517 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ZFAND2BQ8WV99 257 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 HSPH1Q92598 858 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ANKS1AQ92625 1134 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 USP6NLQ92738 828 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 EXOC4Q96A65 974 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ELMO3Q96BJ8 720 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms