RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TRAPPC10P48553 1259 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 PTGDRQ13258 359 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 BMS1Q14692 1282 aaKnown RBP20.05■□□□□ 0.8
CHD3-214ENST00000572579 EEF1DP3Q658K8 133 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 CES5AQ6NT32 575 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 CCDC43Q96MW1 224 aaKnown RBP20.05■□□□□ 0.8
CHD3-214ENST00000572579 RPS6KC1Q96S38 1066 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 HERC2P3Q9BVR0 1158 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 CHST7Q9NS84 486 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 ZDBF2Q9HCK1 2354 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 PP2D1A8MPX8 630 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 MYBP10242 640 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 KLRC2P26717 231 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 CDC25AP30304 524 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 NCBP1Q09161 790 aaKnown RBP20.04■□□□□ 0.8
CHD3-214ENST00000572579 KIAA1841Q6NSI8 718 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 CABP7Q86V35 215 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 FAM184AQ8NB25 1140 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 PBXIP1Q96AQ6 731 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 NECTIN4Q96NY8 510 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 MMTAG2Q9BU76 263 aaKnown RBP20.04■□□□□ 0.8
CHD3-214ENST00000572579 RXFP1Q9HBX9 757 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 MRPL17Q9NRX2 175 aaKnown RBP20.04■□□□□ 0.8
CHD3-214ENST00000572579 PRMT7Q9NVM4 692 aaPredicted RBP20.04■□□□□ 0.8
CHD3-214ENST00000572579 DZANK1Q9NVP4 752 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 PARP2Q9UGN5 583 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 KIAA1024Q9UPX6 916 aa20.04■□□□□ 0.8
CHD3-214ENST00000572579 ARHGEF35A5YM69 484 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 PTGESO14684 152 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 PDGFBP01127 241 aaPredicted RBP20.03■□□□□ 0.8
CHD3-214ENST00000572579 CCT6AP40227 531 aaKnown RBP20.03■□□□□ 0.8
CHD3-214ENST00000572579 MTHFRP42898 656 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 DSG1Q02413 1049 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 SIGLEC14Q08ET2 396 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 NAB2Q15742 525 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 ATAT1Q5SQI0 421 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 NT5DC1Q5TFE4 455 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 GPR149Q86SP6 731 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 PRIMPOLQ96LW4 560 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 MFSD14AQ96MC6 490 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
CHD3-214ENST00000572579 BHMT2Q9H2M3 363 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 SNTG2Q9NY99 539 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 PIEZO1Q92508 2521 aa20.03■□□□□ 0.8
CHD3-214ENST00000572579 ACKR2O00590 384 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 BRD1O95696 1058 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 ASGR2P07307 311 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 PDIA5Q14554 519 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 KCNK18Q7Z418 384 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 PPFIBP1Q86W92 1011 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 DAW1Q8N136 415 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 TMEM87AQ8NBN3 555 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 KREMEN2Q8NCW0 462 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 ERMNQ8TAM6 284 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 RIPOR3Q96MK2 946 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 EMILIN2Q9BXX0 1053 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 LIMD1Q9UGP4 676 aa20.02■□□□□ 0.8
CHD3-214ENST00000572579 E9PMD0 336 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 SPATA31D3P0C874 917 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 MUTP22033 750 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 NAMPTP43490 491 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 VCPP55072 806 aaKnown RBP20.01■□□□□ 0.79
CHD3-214ENST00000572579 NHLH1Q02575 133 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 PRPF4BQ13523 1007 aaKnown RBP20.01■□□□□ 0.79
CHD3-214ENST00000572579 SPATA31D4Q6ZUB0 917 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 PRSS33Q8NF86 280 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 COLEC11Q9BWP8 271 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 SFXN1Q9H9B4 322 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.01■□□□□ 0.79
CHD3-214ENST00000572579 DDX19AQ9NUU7 478 aaKnown RBP20.01■□□□□ 0.79
CHD3-214ENST00000572579 STK39Q9UEW8 545 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 NR2E1Q9Y466 385 aa20.01■□□□□ 0.79
CHD3-214ENST00000572579 N4BP1O75113 896 aaKnown RBP20■□□□□ 0.79
CHD3-214ENST00000572579 PRKCBP05771 671 aa20■□□□□ 0.79
CHD3-214ENST00000572579 URODP06132 367 aa20■□□□□ 0.79
CHD3-214ENST00000572579 LIG1P18858 919 aa20■□□□□ 0.79
CHD3-214ENST00000572579 GLUD2P49448 558 aa20■□□□□ 0.79
CHD3-214ENST00000572579 GRIK3Q13003 919 aa20■□□□□ 0.79
CHD3-214ENST00000572579 RABEP1Q15276 862 aa20■□□□□ 0.79
CHD3-214ENST00000572579 FUT10Q6P4F1 479 aa20■□□□□ 0.79
CHD3-214ENST00000572579 LILRA6Q6PI73 481 aa20■□□□□ 0.79
CHD3-214ENST00000572579 ZBTB8OSQ8IWT0 167 aa20■□□□□ 0.79
CHD3-214ENST00000572579 ZDHHC14Q8IZN3 488 aa20■□□□□ 0.79
CHD3-214ENST00000572579 TMX3Q96JJ7 454 aa20■□□□□ 0.79
CHD3-214ENST00000572579 C2orf40Q9H1Z8 148 aa20■□□□□ 0.79
CHD3-214ENST00000572579 RFPL2O75678 378 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 RECQL4O94761 1208 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 RPL17P18621 184 aaKnown RBP19.99■□□□□ 0.79
CHD3-214ENST00000572579 MAPK7Q13164 816 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 GNL2Q13823 731 aaKnown RBP19.99■□□□□ 0.79
CHD3-214ENST00000572579 MAPK6Q16659 721 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 CD300LGQ6UXG3 332 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 TAS1R3Q7RTX0 852 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 FBXL6Q8N531 539 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 DEPTORQ8TB45 409 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 ZNF707Q96C28 371 aaPredicted RBP19.99■□□□□ 0.79
CHD3-214ENST00000572579 RUSC1Q9BVN2 902 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms