RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 UBE4BO95155 1302 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CLDN3O15551 220 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 UBOX5O94941 541 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 BTNL9Q6UXG8 535 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 PPM1KQ8N3J5 372 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ANKRD42Q8N9B4 389 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 EPS8L1Q8TE68 723 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ZDHHC15Q96MV8 337 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 WNT8AQ9H1J5 351 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CTNNAL1Q9UBT7 734 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 EP400Q96L91 3159 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 SLC8A1P32418 973 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 GBP1P32455 592 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 ECE1P42892 770 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 SIX1Q15475 284 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 ACCSLQ4AC99 568 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 INTS8Q75QN2 995 aaKnown RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 PLEKHO2Q8TD55 490 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 MAGEC3Q8TD91 643 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 ARHGEF2Q92974 986 aaKnown RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 CD101Q93033 1021 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 TMEM109Q9BVC6 243 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 NSRP1Q9H0G5 558 aaKnown RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 STMN4Q9H169 189 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 GOLGA8IPA6NC78 632 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 GOLGA8JA6NMD2 632 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 PIK3CDO00329 1044 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 HGSO14964 777 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 SNX3O60493 162 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 RFX1P22670 979 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 TRIP13Q15645 432 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-205ENST00000571272 CEP55Q53EZ4 464 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 RNF207Q6ZRF8 634 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 SLC9A9Q8IVB4 645 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 KCTD17Q8N5Z5 321 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 ZNF653Q96CK0 615 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 CCDC134Q9H6E4 229 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 KCNK9Q9NPC2 374 aa18.74■□□□□ 0.59
SCARF1-205ENST00000571272 TMEM120BA0PK00 339 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 ECEL1O95672 775 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 GGPS1O95749 300 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 ADRA2BP18089 450 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 KCNJ2P63252 427 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 TNFAIP8L3Q5GJ75 292 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 C1orf220Q5T0J3 134 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 CROCCP2Q86T23 111 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 RPAINQ86UA6 219 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 VEZTQ9HBM0 779 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 L3MBTL1Q9Y468 752 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
SCARF1-205ENST00000571272 C21orf2O43822 256 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 GSTA1P08263 222 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 CHKAP35790 457 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 PDE6CP51160 858 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 EPC2Q52LR7 807 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 PADI6Q6TGC4 694 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 KIRREL3Q8IZU9 778 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 AAASQ9NRG9 546 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 HOMER3Q9NSC5 361 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 ASIC3Q9UHC3 531 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 AFF2P51816 1311 aa18.73■□□□□ 0.59
SCARF1-205ENST00000571272 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 ADCY1Q08828 1119 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 CYP1B1Q16678 543 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 NUGGCQ68CJ6 796 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 GDAP1Q8TB36 358 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 KREMEN1Q96MU8 473 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 RUNDC3BQ96NL0 473 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 STRA6Q9BX79 667 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 NOCTQ9UK39 431 aaKnown RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 ECM2O94769 699 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 STAT2P52630 851 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 MAP2K1Q02750 393 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 KRT17Q04695 432 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 ZKSCAN8Q15776 578 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 CYFIP1Q7L576 1253 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 ATG4AQ8WYN0 398 aa18.72■□□□□ 0.59
SCARF1-205ENST00000571272 TACO1Q9BSH4 297 aaKnown RBP18.72■□□□□ 0.59
SCARF1-205ENST00000571272 TP73O15350 636 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 MXI1P50539 228 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 RWDD2BP57060 319 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 SGO2Q562F6 1265 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 STAMBPL1Q96FJ0 436 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 PWWP2AQ96N64 755 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 TMEM117Q9H0C3 514 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 HSPBP1Q9NZL4 362 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 ZBTB21Q9ULJ3 1066 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 SIPA1L1O43166 1804 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 CALCAP01258 141 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 VPS41P49754 854 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 FMO1Q01740 532 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 RASA3Q14644 834 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 MFSD5Q6N075 450 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 PHLDB2Q86SQ0 1253 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 USP15Q9Y4E8 981 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms