RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MAP4K3Q8IVH8 894 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PEX5LQ8IYB4 626 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 GJD3Q8N144 294 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 AHI1Q8N157 1196 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 KRT222Q8N1A0 295 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CMTR1Q8N1G2 835 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZNF619Q8N2I2 560 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LRRC71Q8N4P6 559 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PCYOX1LQ8NBM8 494 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 SLC44A5Q8NCS7 719 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC148Q8NFR7 591 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 TNIP2Q8NFZ5 429 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 SMARCC2Q8TAQ2 1214 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 IGDCC4Q8TDY8 1250 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ADAMTS18Q8TE60 1221 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 UTP15Q8TED0 518 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 LEO1Q8WVC0 666 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 SYMPKQ92797 1274 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 ATP2A3Q93084 1043 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 KIFC2Q96AC6 838 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 DYNLL2Q96FJ2 89 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC138Q96M89 665 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 FAM193BQ96PV7 902 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 PSMG3-AS1Q96PY0 264 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 SH3GL1Q99961 368 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 RHOXF2Q9BQY4 288 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 SDF4Q9BRK5 362 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 NOC4LQ9BVI4 516 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 TRIM7Q9C029 511 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 WDR12Q9GZL7 423 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC68Q9H2F9 335 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 GRPEL1Q9HAV7 217 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 IL21Q9HBE4 155 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LY9Q9HBG7 655 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ARFGAP3Q9NP61 516 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 DCP1AQ9NPI6 582 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 SH2B1Q9NRF2 756 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 TOMM22Q9NS69 142 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 C1orf112Q9NSG2 853 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 INTS10Q9NVR2 710 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 IL20Q9NYY1 176 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CALCOCO1Q9P1Z2 691 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 DACH1Q9UI36 760 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZHX1Q9UKY1 873 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZBTB21Q9ULJ3 1066 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 GIT1Q9Y2X7 761 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 HCN4Q9Y3Q4 1203 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 DAGLAQ9Y4D2 1042 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 MAP4K5Q9Y4K4 846 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZMYM6O95789 1325 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 SALL1Q9NSC2 1324 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LCTP09848 1927 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 RLFQ13129 1914 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 MCM3APO60318 1980 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 ARPC4-TTLL3A0A0A6YYG9 625 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 RCCD1A6NED2 376 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 LRRC10BA6NIK2 292 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 YDJCA8MPS7 323 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 GOLGA8BA8MQT2 603 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 ESPNB1AK53 854 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 H0Y626 953 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 KIF2AO00139 706 aaPredicted RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 EIF1AYO14602 144 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 IFIT3O14879 490 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 AHCYL1O43865 530 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 RANBP6O60518 1105 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 ZBED4O75132 1171 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 PALMO75781 387 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 STAM2O75886 525 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 DDHD2O94830 711 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 SMC2O95347 1197 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 ZBTB7AO95365 584 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 GJB6O95452 261 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 YEATS4O95619 227 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 TBC1D8O95759 1140 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 ASGR2P07307 311 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 USP17L7P0C7H9 530 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 IMPDH2P12268 514 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 DPEP1P16444 411 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 RHCEP18577 417 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 KCNA3P22001 575 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 CCND1P24385 295 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 ATP5F1P24539 256 aaPredicted RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 ATP5DP30049 168 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 GRIK1P39086 918 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 BTDP43251 543 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 SMTNP53814 917 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 NRLP54845 237 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 SLC12A2P55011 1212 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 EIF6P56537 245 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 POLR2FP61218 127 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 TMPRSS15P98073 1019 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 RHDQ02161 417 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 TNFAIP2Q03169 654 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 DNM1Q05193 864 aaKnown RBP3.86□□□□□ -1.79
SMG6-208ENST00000570874 AP1B1Q10567 949 aa3.86□□□□□ -1.79
SMG6-208ENST00000570874 TRAF1Q13077 416 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms