RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GLUD2P49448 558 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 RARRES1P49788 294 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 DSC1Q08554 894 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 ANKRD1Q15327 319 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 OTOP3Q7RTS5 596 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 CNNM3Q8NE01 707 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 HASPINQ8TF76 798 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 GTF3C6Q969F1 213 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 HERC2P3Q9BVR0 1158 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 KCNK12Q9HB15 430 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 POLD4Q9HCU8 107 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 UBN1Q9NPG3 1134 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 USTQ9Y2C2 406 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 TDRD15B5MCY1 1934 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 PI15O43692 258 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 NR1I2O75469 434 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 DGAT1O75907 488 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 LYPLA2O95372 231 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 GLUD1P00367 558 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 SPATA31C1P0DKV0 1188 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 AXLP30530 894 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 NEK4P51957 841 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 TDGQ13569 410 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 TRIM29Q14134 588 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 ASTLQ6HA08 431 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 FUT10Q6P4F1 479 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 GSTCDQ8NEC7 633 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 RIN2Q8WYP3 895 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 SMG7Q92540 1137 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 CCDC51Q96ER9 411 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 MTMR9Q96QG7 549 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 PAAF1Q9BRP4 392 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 CXCL16Q9H2A7 254 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 PIDD1Q9HB75 910 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 EP300Q09472 2414 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 PLXNA3P51805 1871 aa9.55□□□□□ -0.88
CTDNEP1-203ENST00000570385 SPTBN4Q9H254 2564 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 DENND4AQ7Z401 1863 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 CASTOR2A6NHX0 329 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 STK25O00506 426 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 MED24O75448 989 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 TADA2AO75478 443 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 NEFLP07196 543 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 CFHP08603 1231 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 ANAPC15P60006 121 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 DSG1Q02413 1049 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 ST3GAL1Q11201 340 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 ZNF174Q15697 407 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 CWF19L1Q69YN2 538 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 SLC27A1Q6PCB7 646 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 PRSS55Q6UWB4 352 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 IFNLR1Q8IU57 520 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 HACE1Q8IYU2 909 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 RNF168Q8IYW5 571 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 SIX5Q8N196 739 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 BSNDQ8WZ55 320 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 MYADMQ96S97 322 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 RXFP1Q9HBX9 757 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 STK39Q9UEW8 545 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 GIT1Q9Y2X7 761 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
CTDNEP1-203ENST00000570385 A0A1B0GUA9 196 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 TGM5O43548 720 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 ST18O60284 1047 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 SEC24BO95487 1268 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 EFEMP2O95967 443 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 NPR3P17342 541 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 PCBP1Q15365 356 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 C15orf39Q6ZRI6 1047 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 GET4Q7L5D6 327 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 ASCL5Q7RTU5 278 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 FRMD5Q7Z6J6 570 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 ZNF707Q96C28 371 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 NT5C3AQ9H0P0 336 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 WDR6Q9NNW5 1121 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 SNTG2Q9NY99 539 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 ADAM28Q9UKQ2 775 aa9.53□□□□□ -0.88
CTDNEP1-203ENST00000570385 CA14Q9ULX7 337 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms