RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PIN4Q9Y237 131 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 ABLIM1O14639 778 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 AP5Z1O43299 807 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 EXTL3O43909 919 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 TPM2P07951 284 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 SELPP16109 830 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 EN2P19622 333 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 AXLP30530 894 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 COPB1P53618 953 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 NOTUMQ6P988 496 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 LRRC8DQ7L1W4 858 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 ADPGKQ9BRR6 497 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 FAM213AQ9BRX8 229 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 TRIM5Q9C035 493 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 METTL14Q9HCE5 456 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 PTPRHQ9HD43 1115 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 IFNKQ9P0W0 207 aa16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-219ENST00000570273 OGTO15294 1046 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 ADRB2P07550 413 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 MCF2P10911 925 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 KRT13P13646 458 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 PAK2Q13177 524 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 LPIN1Q14693 890 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 LRRC26Q2I0M4 334 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 CBWD2Q8IUF1 395 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 RDH13Q8NBN7 331 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
HERPUD1-219ENST00000570273 A0A1B0GUA9 196 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 GPR182O15218 404 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 MAPK13O15264 365 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 NPTXRO95502 500 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 HOXA11P31270 313 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 CD52P31358 61 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 UBASH3AP57075 661 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 NFX1Q12986 1120 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 MAN2A1Q16706 1144 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 FILIP1LQ4L180 1135 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 DCAF17Q5H9S7 520 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 SLC27A1Q6PCB7 646 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 APTXQ7Z2E3 356 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 UBE2Q1Q7Z7E8 422 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 TRIM59Q8IWR1 403 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 FBXL18Q96ME1 805 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 VPS16Q9H269 839 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 AGO3Q9H9G7 860 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ERVK-5Q9HDB9 667 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ST3GAL5Q9UNP4 418 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 TULP1O00294 542 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 CLTBP09497 229 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ACOT2P49753 483 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 ZNF75DP51815 510 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 THNSL1Q8IYQ7 743 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 OSBPL7Q9BZF2 842 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 XPO4Q9C0E2 1151 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
HERPUD1-219ENST00000570273 DNAH12Q6ZR08 3092 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 A0A1B0GTH6 734 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 RBAK-RBAKDNI3L0D1 243 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 CAPN15O75808 1086 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 ADCY5O95622 1261 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 TPM3P06753 285 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 PPP2R3AQ06190 1150 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 CYP24A1Q07973 514 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 BFSP1Q12934 665 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 TWF2Q6IBS0 349 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 CEP120Q8N960 986 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 BORCS6Q96GS4 357 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 TMEM39AQ9NV64 488 aa16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-219ENST00000570273 TBX21Q9UL17 535 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms