RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 ARRDC1-AS1Q9H2J1 176 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 CHRDQ9H2X0 955 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 RXFP3Q9NSD7 469 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 PCDHA10Q9Y5I2 948 aa10.22□□□□□ -0.77
TCF4-243ENST00000569357 DOCK8Q8NF50 2099 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 SRRM3A6NNA2 597 aaPredicted RBP10.21□□□□□ -0.77
TCF4-243ENST00000569357 F8W810 466 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 DHX15O43143 795 aaKnown RBP10.21□□□□□ -0.77
TCF4-243ENST00000569357 ZNF623O75123 536 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 OATP04181 439 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 LIMK1P53667 647 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 NAPAP54920 295 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 RAB11FIP4Q86YS3 637 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 NCOA7Q8NI08 942 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 MCRS1Q96EZ8 462 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 PLA2G2FQ9BZM2 168 aa10.21□□□□□ -0.77
TCF4-243ENST00000569357 INO80BQ9C086 356 aaPredicted RBP10.21□□□□□ -0.77
TCF4-243ENST00000569357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.21□□□□□ -0.77
TCF4-243ENST00000569357 FAM86B1E9PN63 330 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 MAN2B1O00754 1011 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 TM4SF5O14894 197 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 NR1I2O75469 434 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 DDAH1O94760 285 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 FOSP01100 380 aaPredicted RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 C8AP07357 584 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 FAM86B2P0C5J1 330 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 DNM2P50570 870 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 NOVA1P51513 510 aaKnown RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 PRKCEQ02156 737 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 MTERF2Q49AM1 385 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 ZNF746Q6NUN9 644 aaPredicted RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 LILRA6Q6PI73 481 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 PRSS55Q6UWB4 352 aaPredicted RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 RHPN2Q8IUC4 686 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 SMAP1Q8IYB5 467 aaPredicted RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 FAM3CQ92520 227 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 MAP4K1Q92918 833 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 NLRP4Q96MN2 994 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 COLEC11Q9BWP8 271 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 LSM14BQ9BX40 385 aaKnown RBP10.2□□□□□ -0.78
TCF4-243ENST00000569357 LNPKQ9C0E8 428 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 BRD9Q9H8M2 597 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 TBC1D22BQ9NU19 505 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 MYH15Q9Y2K3 1946 aa10.2□□□□□ -0.78
TCF4-243ENST00000569357 CNTNAP2Q9UHC6 1331 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 HIP1O00291 1037 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 XYLBO75191 536 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 CNR2P34972 360 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
TCF4-243ENST00000569357 CDC42EP1Q00587 391 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 GRM2Q14416 872 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 FUT10Q6P4F1 479 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 LONP2Q86WA8 852 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 RNF168Q8IYW5 571 aaPredicted RBP10.19□□□□□ -0.78
TCF4-243ENST00000569357 IGDCC4Q8TDY8 1250 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 ZCCHC14Q8WYQ9 949 aaKnown RBP10.19□□□□□ -0.78
TCF4-243ENST00000569357 RABGGTAQ92696 567 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 SH2D3AQ9BRG2 576 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 ADAM33Q9BZ11 813 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 GPR62Q9BZJ7 368 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 SMOC1Q9H4F8 434 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 RIC8AQ9NPQ8 531 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 CHST7Q9NS84 486 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 HCFC1R1Q9NWW0 138 aa10.19□□□□□ -0.78
TCF4-243ENST00000569357 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
TCF4-243ENST00000569357 MRPS23Q9Y3D9 190 aaKnown RBP10.19□□□□□ -0.78
TCF4-243ENST00000569357 TMEM8BA6NDV4 472 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 SHISA7A6NL88 538 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 E7EWF7 191 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 GIPC1O14908 333 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 CHMP2AO43633 222 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ZNF862O60290 1169 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ECI2O75521 394 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 PAPLNO95428 1278 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 TOP3BO95985 862 aaKnown RBP10.18□□□□□ -0.78
TCF4-243ENST00000569357 CYP21A2P08686 494 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 HNRNPA1P09651 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
TCF4-243ENST00000569357 ZNF806P0C7X5 589 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ITGA4P13612 1032 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 SREBF1P36956 1147 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 MLH1P40692 756 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 SCNN1GP51170 649 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ADCY7P51828 1080 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ANTXR2P58335 489 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 CREMQ03060 361 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 ZNF252P-AS1Q0IIN9 211 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
TCF4-243ENST00000569357 JAKMIP3Q5VZ66 844 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
TCF4-243ENST00000569357 WWC2Q6AWC2 1192 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms