RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 MSL2Q9HCI7 577 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 IL23AQ9NPF7 189 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 KCNG1Q9UIX4 513 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 SH3BP1Q9Y3L3 701 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 TSC22D4Q9Y3Q8 395 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 TCAF1Q9Y4C2 921 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 CPS1P31327 1500 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 A2ML1A8K2U0 1454 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 A2MP01023 1474 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 CEP152O94986 1710 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 FMN1Q68DA7 1419 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 PLXNC1O60486 1568 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 A0A1W2PR48 441 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 UBE2QL1A1L167 161 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 GOLGA8BA8MQT2 603 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 MUSKO15146 869 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 PLSCR1O15162 318 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 DNAJC6O75061 913 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 STC2O76061 302 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 CFBP00751 764 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 JUNP05412 331 aaKnown RBP4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 ENPP1P22413 925 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 GPR15P49685 360 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 SCAND1P57086 179 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 MGAT5Q09328 741 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 MAN2A1Q16706 1144 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 GAGE13Q4V321 117 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPDYAQ5MJ70 313 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPTY2D1Q68D10 685 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 KRT40Q6A162 431 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPRED1Q7Z699 444 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPATS2Q86XZ4 545 aaKnown RBP4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 UNC5BQ8IZJ1 945 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 OR14C36Q8NHC7 312 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 EDAQ92838 391 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 GPR20Q99678 358 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 POLR3GLQ9BT43 218 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 TRIM8Q9BZR9 551 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 C14orf119Q9NWQ9 140 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 NCDNQ9UBB6 729 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 CDY2AQ9Y6F7 541 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 LRRC7Q96NW7 1537 aa4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 ZC3H13Q5T200 1668 aaKnown RBP4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 RNF17Q9BXT8 1623 aaKnown RBP4.54□□□□□ -1.68
HMGB1P6-201ENST00000569046 GPATCH8Q9UKJ3 1502 aaKnown RBP4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 GOLGA8AA7E2F4 631 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 KIF3BO15066 747 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 MTSS1O43312 755 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 TMEM127O75204 238 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ALDH1A2O94788 518 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 CPEP16870 476 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ERVK-21P61565 698 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 UGT8Q16880 541 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ZXDCQ2QGD7 858 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 CCDC178Q5BJE1 867 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 RNF219Q5W0B1 726 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 FAM111BQ6SJ93 734 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 CMTM4Q8IZR5 234 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 D2HGDHQ8N465 521 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ATL2Q8NHH9 583 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 SH3RF3Q8TEJ3 882 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ACAP3Q96P50 834 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ORAI2Q96SN7 254 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ENKD1Q9H0I2 346 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 TLR9Q9NR96 1032 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 DPP7Q9UHL4 492 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 TESMINQ9Y4I5 508 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 ROBO1Q9Y6N7 1651 aa4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 NPHP4O75161 1426 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P6-201ENST00000569046 UGGT1Q9NYU2 1555 aa4.53□□□□□ -1.69
HMGB1P6-201ENST00000569046 TNRQ92752 1358 aa4.53□□□□□ -1.69
HMGB1P6-201ENST00000569046 PHLPP1O60346 1717 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 UBR1Q8IWV7 1749 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 MATN3O15232 486 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 GPR3P46089 330 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 AMPD3Q01432 767 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 PUM1Q14671 1186 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 PRKD1Q15139 912 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 HS1BP3Q53T59 392 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 LMBR1LQ6UX01 489 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 ABHD15Q6UXT9 468 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 TAS1R1Q7RTX1 841 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 KCNK18Q7Z418 384 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 TSPEARQ8WU66 669 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 RSAD2Q8WXG1 361 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 AHCYL2Q96HN2 611 aaKnown RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 GPATCH3Q96I76 525 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 CDK5RAP1Q96SZ6 601 aaKnown RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 TCF25Q9BQ70 676 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 QRSL1Q9H0R6 528 aaKnown RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 TMX1Q9H3N1 280 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 CFDP1Q9UEE9 299 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 RCAN3Q9UKA8 241 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 ATP8A1Q9Y2Q0 1164 aa4.52□□□□□ -1.69
HMGB1P6-201ENST00000569046 WASHC2CQ9Y4E1 1318 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 DEPDC5O75140 1603 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms