RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KCTD10Q9H3F6 313 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 EXOC7Q9UPT5 735 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 A0A0B4J269 797 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 BIN1O00499 593 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 FGFR1P11362 822 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 SKIP12755 728 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 IBSPP21815 317 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-222ENST00000568034 CLLU1OSQ5K130 101 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 ISM2Q6H9L7 571 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 FAM117BQ6P1L5 589 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 ZBTB33Q86T24 672 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 GUF1Q8N442 669 aaKnown RBP19.69■□□□□ 0.74
COMMD4-222ENST00000568034 ADPGKQ9BRR6 497 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 MAPK8IP1Q9UQF2 711 aa19.69■□□□□ 0.74
COMMD4-222ENST00000568034 CLDN3O15551 220 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 MEFVO15553 781 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 DGKIO75912 1065 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 UPP2O95045 317 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 EOMESO95936 686 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 CD44P16070 742 aaKnown RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 GATMP50440 423 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 HTRA4P83105 476 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 NFKBIBQ15653 356 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 KNOP1Q1ED39 458 aaKnown RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 ZBTB41Q5SVQ8 909 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 TMEM192Q8IY95 271 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 ZNF689Q96CS4 500 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 CBWD1Q9BRT8 395 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 TRIM6Q9C030 488 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-222ENST00000568034 GBP3Q9H0R5 595 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 PCDHB7Q9Y5E2 793 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 GBF1Q92538 1859 aa19.68■□□□□ 0.74
COMMD4-222ENST00000568034 FNDC1Q4ZHG4 1894 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-222ENST00000568034 STAG3L1P0CL83 205 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 HARSP12081 509 aaKnown RBP19.67■□□□□ 0.74
COMMD4-222ENST00000568034 PTMSP20962 102 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 GRM5P41594 1212 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 PRCPP42785 496 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 RABGGTBP53611 331 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 CCDC183Q5T5S1 534 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 SYCP3Q8IZU3 236 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 TRIML1Q8N9V2 468 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 RNF169Q8NCN4 708 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 ZSWIM2Q8NEG5 633 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 TCHPQ9BT92 498 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 AGPAT3Q9NRZ7 376 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 SNTG2Q9NY99 539 aa19.67■□□□□ 0.74
COMMD4-222ENST00000568034 INPPL1O15357 1258 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 RECQL4O94761 1208 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 GARTP22102 1010 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 AKAP5P24588 427 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 AFF1P51825 1210 aaKnown RBP19.66■□□□□ 0.74
COMMD4-222ENST00000568034 ZCWPW2Q504Y3 356 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 ADSSL1Q8N142 457 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 SP7Q8TDD2 431 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-222ENST00000568034 PGBD4Q96DM1 585 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 CASD1Q96PB1 797 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 APOL6Q9BWW8 343 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 CXCL16Q9H2A7 254 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 LRFN2Q9ULH4 789 aa19.66■□□□□ 0.74
COMMD4-222ENST00000568034 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 PPP1R3GB7ZBB8 358 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 OGTO15294 1046 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 OFD1O75665 1012 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 SLC34A2O95436 690 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 ITGA4P13612 1032 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 MYOGP15173 224 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 PBX2P40425 430 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 TNFSF9P41273 254 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 LRIT3Q3SXY7 679 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 SLFN12LQ6IEE8 588 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 CAVIN1Q6NZI2 390 aaKnown RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 CRELD2Q6UXH1 353 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 APBB1IPQ7Z5R6 666 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 C12orf56Q8IXR9 622 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 THNSL1Q8IYQ7 743 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 GSTCDQ8NEC7 633 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 HELQQ8TDG4 1101 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 POMGNT1Q8WZA1 660 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 MSTO1Q9BUK6 570 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 GTPBP4Q9BZE4 634 aaKnown RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 SEMA6BQ9H3T3 888 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 RSAD1Q9HA92 442 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 TYW1Q9NV66 732 aaKnown RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 YBX2Q9Y2T7 364 aaKnown RBP19.65■□□□□ 0.74
COMMD4-222ENST00000568034 GIT1Q9Y2X7 761 aa19.65■□□□□ 0.74
COMMD4-222ENST00000568034 LCHNA4D1U4 455 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 ARHGEF15O94989 841 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 MLH1P40692 756 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 OSTNP61366 133 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 SNRPFP62306 86 aaKnown RBP19.64■□□□□ 0.73
COMMD4-222ENST00000568034 ARMCX5Q6P1M9 558 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 RAD9AQ99638 391 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 PBX4Q9BYU1 374 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 TMEM117Q9H0C3 514 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 CPSF3Q9UKF6 684 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms