RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SMAD4Q13485 552 aaKnown RBP27.74■■■□□ 2.03
FANCA-228ENST00000567943 PRPF4BQ13523 1007 aaKnown RBP27.74■■■□□ 2.03
FANCA-228ENST00000567943 EEF1DP3Q658K8 133 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 TMEM184AQ6ZMB5 413 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 SMRP1Q8NCR6 262 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 RASSF8Q8NHQ8 419 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 AUTS2Q8WXX7 1259 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 TMEM175Q9BSA9 504 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 SRPRBQ9Y5M8 271 aaKnown RBP27.74■■■□□ 2.03
FANCA-228ENST00000567943 NRP1O14786 923 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 LIG1P18858 919 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 NPTX2P47972 431 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 SLC12A3P55017 1021 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 RAD51AP2Q09MP3 1159 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 SMC1AQ14683 1233 aaKnown RBP27.73■■■□□ 2.03
FANCA-228ENST00000567943 KARSQ15046 597 aaKnown RBP27.73■■■□□ 2.03
FANCA-228ENST00000567943 SPECC1Q5M775 1068 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 NT5DC1Q5TFE4 455 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 DRC1Q96MC2 740 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 CXCL16Q9H2A7 254 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 MARCH5Q9NX47 278 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 KLK14Q9P0G3 267 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 TRIP11Q15643 1979 aa27.73■■■□□ 2.03
FANCA-228ENST00000567943 ALDH2P05091 517 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 PDIA4P13667 645 aaKnown RBP27.72■■■□□ 2.03
FANCA-228ENST00000567943 PLCG1P19174 1290 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 GUCY2CP25092 1073 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 PEX3P56589 373 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 ZP2Q05996 745 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 SLC39A14Q15043 492 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 TAS1R3Q7RTX0 852 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 CLIC6Q96NY7 704 aa27.72■■■□□ 2.03
FANCA-228ENST00000567943 MYH15Q9Y2K3 1946 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 CARNS1A5YM72 827 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 CCDC169A6NNP5 214 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 SFI1A8K8P3 1242 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 F8W810 466 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 N4BP3O15049 544 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 CXCL14O95715 111 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 EFEMP2O95967 443 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 ZSCAN22P10073 491 aaPredicted RBP27.71■■■□□ 2.03
FANCA-228ENST00000567943 CTSAP10619 480 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 EFNA5P52803 228 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 USP49Q70CQ1 688 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 GJD3Q8N144 294 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 EPSTI1Q96J88 318 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 FAM193BQ96PV7 902 aaPredicted RBP27.71■■■□□ 2.03
FANCA-228ENST00000567943 TIPINQ9BVW5 301 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 CCSER1Q9C0I3 900 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 FAM50BQ9Y247 325 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 FAN1Q9Y2M0 1017 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 IRAK3Q9Y616 596 aa27.71■■■□□ 2.03
FANCA-228ENST00000567943 C19orf67A6NJJ6 358 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 CLASP2O75122 1294 aaKnown RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 NASPP49321 788 aaPredicted RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 DMP1Q13316 513 aaPredicted RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 DHX8Q14562 1220 aaKnown RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 TMEM132AQ24JP5 1023 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 LLGL2Q6P1M3 1020 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 HACE1Q8IYU2 909 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 ZNF396Q96N95 335 aaPredicted RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 ARHGAP28Q9P2N2 729 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 TFIP11Q9UBB9 837 aaKnown RBP27.7■■■□□ 2.02
FANCA-228ENST00000567943 PRKAG3Q9UGI9 489 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 PARP2Q9UGN5 583 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 ZMYM2Q9UBW7 1377 aa27.7■■■□□ 2.02
FANCA-228ENST00000567943 STK38Q15208 465 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 ARSHQ5FYA8 562 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 SYCE2Q6PIF2 218 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 ADHFE1Q8IWW8 467 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 BLOC1S4Q9NUP1 217 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 SNTG2Q9NY99 539 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 KCND2Q9NZV8 630 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 PRG3Q9Y2Y8 225 aaPredicted RBP27.69■■■□□ 2.02
FANCA-228ENST00000567943 HCFC2Q9Y5Z7 792 aa27.69■■■□□ 2.02
FANCA-228ENST00000567943 MORC2Q9Y6X9 1032 aaPredicted RBP27.69■■■□□ 2.02
FANCA-228ENST00000567943 NPHP3-ACAD11A0A0J9YXS1 232 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 FSD2A1L4K1 749 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 F13A1P00488 732 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 PKP1Q13835 747 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 PTPN14Q15678 1187 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 FOXD4L6Q3SYB3 417 aaPredicted RBP27.68■■■□□ 2.02
FANCA-228ENST00000567943 FOXD4L3Q6VB84 417 aaPredicted RBP27.68■■■□□ 2.02
FANCA-228ENST00000567943 TAS1R1Q7RTX1 841 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 RNF168Q8IYW5 571 aaPredicted RBP27.68■■■□□ 2.02
FANCA-228ENST00000567943 KRI1Q8N9T8 703 aaKnown RBP27.68■■■□□ 2.02
FANCA-228ENST00000567943 RAD54LQ92698 747 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 S1PR5Q9H228 398 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 EPHX3Q9H6B9 360 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 C17orf75Q9HAS0 396 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 KMT5AQ9NQR1 393 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 CACNG4Q9UBN1 327 aa27.68■■■□□ 2.02
FANCA-228ENST00000567943 USP15Q9Y4E8 981 aaPredicted RBP27.68■■■□□ 2.02
FANCA-228ENST00000567943 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.67■■■□□ 2.02
FANCA-228ENST00000567943 K7ERI5 159 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 PTGESO14684 152 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 LILRB3O75022 631 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 RECQL4O94761 1208 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 OR1G1P47890 313 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 CACNB1Q02641 598 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms