RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
CDH3-206ENST00000567674 ELAVL2Q12926 359 aaKnown RBP12.34□□□□□ -0.43
CDH3-206ENST00000567674 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
CDH3-206ENST00000567674 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 HFE2Q6ZVN8 426 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 C1orf186Q6ZWK4 172 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 LPPQ93052 612 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 PRRX2Q99811 253 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 S1PR5Q9H228 398 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
CDH3-206ENST00000567674 FNIP2Q9P278 1114 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 DDHD2O94830 711 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 CD2BP2O95400 341 aaKnown RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 BRD1O95696 1058 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 PRKCBP05771 671 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 MTHFRP42898 656 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 SLC11A1P49279 550 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 ECM1Q16610 540 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 KYAT1Q16773 422 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 HERC4Q5GLZ8 1057 aaPredicted RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 C15orf39Q6ZRI6 1047 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 EP400NLQ6ZTU2 488 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 ZNF280BQ86YH2 543 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 CALML4Q96GE6 196 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 RIPOR3Q96MK2 946 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 UROC1Q96N76 676 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 ADAM7Q9H2U9 754 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 CHST7Q9NS84 486 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
CDH3-206ENST00000567674 ARHGAP28Q9P2N2 729 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 ODF2LQ9ULJ1 636 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 USTQ9Y2C2 406 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
CDH3-206ENST00000567674 MYO7AQ13402 2215 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 HIDE1A8MVS5 230 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 LINC01565O15544 149 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 CLASP2O75122 1294 aaKnown RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 THP07101 528 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 IBSPP21815 317 aaPredicted RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 UBA7P41226 1012 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 POU5F1Q01860 360 aaKnown RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 TUSC3Q13454 348 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 IL17AQ16552 155 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 ZPBP2Q6X784 338 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 GSTCDQ8NEC7 633 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 CMASQ8NFW8 434 aaPredicted RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 SNX21Q969T3 373 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 GAD1Q99259 594 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
CDH3-206ENST00000567674 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 DNAJB4Q9UDY4 337 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 INPP5FQ9Y2H2 1132 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
CDH3-206ENST00000567674 ATG2AQ2TAZ0 1938 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 MEIS3P2A8K0S8 358 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 PER2O15055 1255 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 POMCP01189 267 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 ADH1AP07327 375 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 PLS3P13797 630 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 PAX3P23760 479 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH3-206ENST00000567674 MLH1P40692 756 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 NPTX2P47972 431 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 DSG1Q02413 1049 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 NBR1Q14596 966 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 XKR4Q5GH76 650 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 ATF7IP2Q5U623 682 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 KIAA0319Q5VV43 1072 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 SYCE2Q6PIF2 218 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 BMP8AQ7Z5Y6 402 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 SLC22A17Q8WUG5 538 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms