RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 TCF25Q9BQ70 676 aa11.09□□□□□ -0.63
NIFKP4-201ENST00000567275 ING3Q9NXR8 418 aa11.09□□□□□ -0.63
NIFKP4-201ENST00000567275 JAG2Q9Y219 1238 aa11.09□□□□□ -0.63
NIFKP4-201ENST00000567275 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
NIFKP4-201ENST00000567275 MTSS1O43312 755 aa11.08□□□□□ -0.64
NIFKP4-201ENST00000567275 PRKD1Q15139 912 aaPredicted RBP11.08□□□□□ -0.64
NIFKP4-201ENST00000567275 BORCS6Q96GS4 357 aa11.08□□□□□ -0.64
NIFKP4-201ENST00000567275 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 CMTM4Q8IZR5 234 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 QRSL1Q9H0R6 528 aaKnown RBP11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 CFDP1Q9UEE9 299 aaPredicted RBP11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 DPP7Q9UHL4 492 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 TSC22D4Q9Y3Q8 395 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
NIFKP4-201ENST00000567275 PLA2R1Q13018 1463 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 HSP90B1P14625 803 aaKnown RBP11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 NPEPPSP55786 919 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 TAS1R1Q7RTX1 841 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 EDAQ92838 391 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 MPHOSPH9Q99550 1183 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 SLC5A4Q9NY91 659 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 A2MP01023 1474 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
NIFKP4-201ENST00000567275 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 A0A1W2PR48 441 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 RTEL1-TNFRSF6BF6WH68 1400 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 NRP1O14786 923 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 CDK17Q00537 523 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 Q6ZSN1 163 aa11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 ZNF808Q8N4W9 903 aaPredicted RBP11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
NIFKP4-201ENST00000567275 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 MTHFD2P13995 350 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 AUTS2Q8WXX7 1259 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 TLR9Q9NR96 1032 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
NIFKP4-201ENST00000567275 CAPN14A8MX76 684 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 PRAMEF4O60810 478 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 LTA4HP09960 611 aaKnown RBP11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 CDSNQ15517 529 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 NECAB2Q7Z6G3 386 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 PAWRQ96IZ0 340 aaKnown RBP11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 TESMINQ9Y4I5 508 aa11.03□□□□□ -0.64
NIFKP4-201ENST00000567275 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.64
NIFKP4-201ENST00000567275 PTPRKQ15262 1439 aa11.02□□□□□ -0.64
NIFKP4-201ENST00000567275 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.64
NIFKP4-201ENST00000567275 INSRRP14616 1297 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 MEF2AQ02078 507 aaPredicted RBP11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 TOR2AQ5JU69 321 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 CNTD1Q8N815 330 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 ORAI2Q96SN7 254 aa11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
NIFKP4-201ENST00000567275 TCOF1Q13428 1488 aaKnown RBP11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 CDK11BP21127 795 aaKnown RBP11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 WNT3AP56704 352 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 AMPD3Q01432 767 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 DUSP2Q05923 314 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 FKBP15Q5T1M5 1219 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
NIFKP4-201ENST00000567275 MBD5Q9P267 1494 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 EHBP1L1Q8N3D4 1523 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 C1QTNF3-AMACRE9PGA6 284 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 CYP27B1O15528 508 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 GPR3P46089 330 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 ERVK-21P61565 698 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
NIFKP4-201ENST00000567275 ZXDCQ2QGD7 858 aaPredicted RBP11□□□□□ -0.65
NIFKP4-201ENST00000567275 SPDYAQ5MJ70 313 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 MFSD5Q6N075 450 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 DBX2Q6ZNG2 339 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 EPC1Q9H2F5 836 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 IFT122Q9HBG6 1241 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 CCM2LQ9NUG4 571 aaPredicted RBP11□□□□□ -0.65
NIFKP4-201ENST00000567275 MYRFQ9Y2G1 1151 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 ADGBQ8N7X0 1667 aa11□□□□□ -0.65
NIFKP4-201ENST00000567275 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
NIFKP4-201ENST00000567275 K7ESF4 209 aa10.99□□□□□ -0.65
NIFKP4-201ENST00000567275 CASRP41180 1078 aa10.99□□□□□ -0.65
NIFKP4-201ENST00000567275 SRSF2Q01130 221 aaKnown RBP10.99□□□□□ -0.65
NIFKP4-201ENST00000567275 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
NIFKP4-201ENST00000567275 MUM1Q2TAK8 710 aa10.99□□□□□ -0.65
NIFKP4-201ENST00000567275 ZNF512Q96ME7 567 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms