RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 GDF3Q9NR23 364 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 ARHGAP28Q9P2N2 729 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 TTC7AQ9ULT0 858 aaPredicted RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 LOC102724159A0A0B4J2E5 919 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 TISP43B9A030 160 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 K7ERI5 159 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 ZMYND10O75800 440 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 RGS20O76081 388 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 ERLIN2O94905 339 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 STBD1O95210 358 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PIGRP01833 764 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 EFNA5P52803 228 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 AP3M2P53677 418 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 GUCY2DQ02846 1103 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PPFIA1Q13136 1202 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PSMD6Q15008 389 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PWP2Q15269 919 aaKnown RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 SEL1L2Q5TEA6 688 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 TAF3Q5VWG9 929 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 LEKR1Q6ZMV7 388 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 RUNDC3BQ96NL0 473 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 RPS6KC1Q96S38 1066 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 SPATC1LQ9H0A9 340 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 RAB17Q9H0T7 212 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PORCNQ9H237 461 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 EPB41L5Q9HCM4 733 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 ST7Q9NRC1 585 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 DMGDHQ9UI17 866 aaKnown RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 RASAL2Q9UJF2 1139 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 AGO2Q9UKV8 859 aaKnown RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 PACSIN2Q9UNF0 486 aaPredicted RBP14.41□□□□□ -0.1
LINC00563-201ENST00000566370 STXBP5LQ9Y2K9 1186 aa14.41□□□□□ -0.1
LINC00563-201ENST00000566370 LRRIQ4A6NIV6 560 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 A6NNZ2 444 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 H3BQF6 201 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 BUB1BO60566 1050 aaPredicted RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 GGPS1O95749 300 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 FTLP02792 175 aaPredicted RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 CYP2C19P33261 490 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 SLC7A5Q01650 507 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 CDR2Q01850 454 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 TTLL12Q14166 644 aaPredicted RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 TUBB8Q3ZCM7 444 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 C1orf220Q5T0J3 134 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 FASTKD5Q7L8L6 764 aaKnown RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 KLHL7Q8IXQ5 586 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 METTL13Q8N6R0 699 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 NLGN2Q8NFZ4 835 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 AFAP1L1Q8TED9 768 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 SCFD2Q8WU76 684 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 GTF3C2Q8WUA4 911 aaPredicted RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 SEPT1Q8WYJ6 367 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 BSNDQ8WZ55 320 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 LRRC45Q96CN5 670 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 CEP89Q96ST8 783 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 FAM213AQ9BRX8 229 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 IMPG2Q9BZV3 1241 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 WNT8AQ9H1J5 351 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 SUGCTQ9HAC7 445 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 XPNPEP1Q9NQW7 623 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 EHD2Q9NZN4 543 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 CWC15Q9P013 229 aaKnown RBP14.4□□□□□ -0.1
LINC00563-201ENST00000566370 UVRAGQ9P2Y5 699 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 TMEM59LQ9UK28 342 aa14.4□□□□□ -0.1
LINC00563-201ENST00000566370 PTPRFP10586 1907 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 A0A0G2JLL6 359 aaPredicted RBP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 RNF40O75150 1001 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 MTA2O94776 668 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 MYBL1P10243 752 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 KRT5P13647 590 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 TNNI1P19237 187 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 TBXAS1P24557 533 aaPredicted RBP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 ADSSP30520 456 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 GBP1P32455 592 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 PIK3CAP42336 1068 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 STAT5BP51692 787 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 HIRAP54198 1017 aaPredicted RBP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 MTMR3Q13615 1198 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 HLTFQ14527 1009 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 KCTD2Q14681 263 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 SURF1Q15526 300 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 CFAP58Q5T655 872 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 METTL7BQ6UX53 244 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 TRIM72Q6ZMU5 477 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 PRRT2Q7Z6L0 340 aaPredicted RBP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 IFT81Q8WYA0 676 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 PAGR1Q9BTK6 254 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 KIFC3Q9BVG8 833 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 C2orf40Q9H1Z8 148 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 TAF1DQ9H5J8 278 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms