RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NME8Q8N427 588 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 NOD1Q9Y239 953 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 GTPBP10A4D1E9 387 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 TREHO43280 583 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 COL6A1P12109 1028 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 ARL2P36404 184 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 PTGISQ16647 500 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 ZNF569Q5MCW4 686 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 C1orf53Q5VUE5 145 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 LRRC71Q8N4P6 559 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 GANQ9H2C0 597 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 MRFAP1Q9Y605 127 aa13.78□□□□□ -0.2
NSMCE1-208ENST00000565070 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 K7ENM7 598 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 TLR3O15455 904 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 IPO7O95373 1038 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 NAMPTP43490 491 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 CDK7P50613 346 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 CLCN3P51790 818 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 SOX10P56693 466 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 PTK7Q13308 1070 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 NAA30Q147X3 362 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 ASTE1Q2TB18 679 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 MTERF4Q7Z6M4 381 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 SERINC5Q86VE9 423 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 AKT3Q9Y243 479 aa13.77□□□□□ -0.21
NSMCE1-208ENST00000565070 ZNF263O14978 683 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 CAND2O75155 1236 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 GTF2BQ00403 316 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 LAMTOR4Q0VGL1 99 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SLC39A5Q6ZMH5 540 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 KIAA0319LQ8IZA0 1049 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 M0QZ92 97 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 GLRA2P23416 452 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 PON1P27169 355 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 KIF11P52732 1056 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 VAV2P52735 878 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 PEX3P56589 373 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 ZNF200P98182 395 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 TUBB2AQ13885 445 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 HIC1Q14526 733 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SNX17Q15036 470 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SPA17Q15506 151 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SFMBT2Q5VUG0 894 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 ZNF410Q86VK4 478 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 RHPN2Q8IUC4 686 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 SLC35F6Q8N357 371 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 LRRN4CLQ8ND94 238 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 PAWRQ96IZ0 340 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 NTPCRQ9BSD7 190 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 TUBB2BQ9BVA1 445 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 FAM49AQ9H0Q0 323 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 AIPL1Q9NZN9 384 aa13.76□□□□□ -0.21
NSMCE1-208ENST00000565070 CTAGE9A4FU28 777 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 RCCD1A6NED2 376 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 RBAK-RBAKDNI3L0D1 243 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 KRT86O43790 486 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 SERPING1P05155 500 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 NPTX2P47972 431 aa13.75□□□□□ -0.21
NSMCE1-208ENST00000565070 EFNA5P52803 228 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms