RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 SCN5AQ14524 2016 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 TISP43B9A030 160 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 PIGRP01833 764 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 LIG4P49917 911 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
SF3B3-205ENST00000564899 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 KIZQ2M2Z5 673 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 NME8Q8N427 588 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 SCLYQ96I15 445 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 CNOT6LQ96LI5 555 aaKnown RBP12.12□□□□□ -0.47
SF3B3-205ENST00000564899 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
SF3B3-205ENST00000564899 GCOM2Q9BZD3 368 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-205ENST00000564899 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 ADAMTS10Q9H324 1103 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 SLC28A3Q9HAS3 691 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
SF3B3-205ENST00000564899 MSRAQ9UJ68 235 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 GINS2Q9Y248 185 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 TRIOO75962 3097 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 MYH11P35749 1972 aa12.12□□□□□ -0.47
SF3B3-205ENST00000564899 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 M0QZ92 97 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SLC16A3O15427 465 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 AP5Z1O43299 807 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 GPR32O75388 356 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 GNA14O95837 355 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SERPINC1P01008 464 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 EDN1P05305 212 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 RPLP2P05387 115 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CYP2J2P51589 502 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 FANCCQ00597 558 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 PTK7Q13308 1070 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 MYBPC2Q14324 1141 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 RAB30Q15771 203 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SLC39A4Q6P5W5 647 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 ZPBP2Q6X784 338 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 FILIP1Q7Z7B0 1213 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SLC43A3Q8NBI5 491 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 ANP32BQ92688 251 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 OSMRQ99650 979 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 TARS2Q9BW92 718 aaKnown RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 SEZ6LQ9BYH1 1024 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 FZD8Q9H461 694 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 CD320Q9NPF0 282 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-205ENST00000564899 USP20Q9Y2K6 914 aa12.11□□□□□ -0.47
SF3B3-205ENST00000564899 ACKR2O00590 384 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 B4GALT4O60513 344 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 EXOC3O60645 756 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 FGBP02675 491 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 EPB41P11171 864 aaKnown RBP12.1□□□□□ -0.47
SF3B3-205ENST00000564899 MTIF2P46199 727 aaKnown RBP12.1□□□□□ -0.47
SF3B3-205ENST00000564899 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
SF3B3-205ENST00000564899 KRT31Q15323 416 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 FAM187BQ17R55 369 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 POMGNT1Q8WZA1 660 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 WNT8BQ93098 351 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 NOC4LQ9BVI4 516 aaKnown RBP12.1□□□□□ -0.47
SF3B3-205ENST00000564899 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 DMAC2Q9NW81 257 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 IFNKQ9P0W0 207 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 ANKFY1Q9P2R3 1169 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
SF3B3-205ENST00000564899 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 MROH7Q68CQ1 1323 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 CNTNAP2Q9UHC6 1331 aa12.1□□□□□ -0.47
SF3B3-205ENST00000564899 C5orf42Q9H799 3197 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms