RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MMP13P45452 471 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 RARRES1P49788 294 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 MXI1P50539 228 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 PLCB4Q15147 1175 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 HAUS6Q7Z4H7 955 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 CDAN1Q8IWY9 1227 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 NUP85Q9BW27 656 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 SLC16A4O15374 487 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 RARAP10276 462 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 CDR1P51861 262 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 RASA3Q14644 834 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 SLC13A5Q86YT5 568 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ZNF564Q8TBZ8 553 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 EPS8L3Q8TE67 593 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ZNF317Q96PQ6 595 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 POP1Q99575 1024 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 WNT8AQ9H1J5 351 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 YDJCA8MPS7 323 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 SPOPO43791 374 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 GZMAP12544 262 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ALAS1P13196 640 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 COILP38432 576 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 FMO1Q01740 532 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 SPP2Q13103 211 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 MIGA2Q7L4E1 593 aa16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ATXN2LQ8WWM7 1075 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 ACTR5Q9H9F9 607 aaPredicted RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 MTRF1LQ9UGC7 380 aaKnown RBP16.63■□□□□ 0.25
GTF3C1-205ENST00000564747 PEX3P56589 373 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 SIX1Q15475 284 aaPredicted RBP16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CBWD2Q8IUF1 395 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 C12orf56Q8IXR9 622 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 VTI1AQ96AJ9 217 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CCDC127Q96BQ5 260 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CXorf56Q9H5V9 222 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CNOT7Q9UIV1 285 aaKnown RBP16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 NFIBO00712 420 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CHUKO15111 745 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 RIPK2O43353 540 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CHRNA5P30532 468 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 RDXP35241 583 aaKnown RBP16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 GTF2BQ00403 316 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CCT6BQ92526 530 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 DBR1Q9UK59 544 aaKnown RBP16.62■□□□□ 0.25
GTF3C1-205ENST00000564747 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 MTA2O94776 668 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 GGPS1O95749 300 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 SCTRP47872 440 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 ALCAMQ13740 583 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 CCDC25Q86WR0 208 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 ZNF653Q96CK0 615 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 SAAL1Q96ER3 474 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 H0YIN7 160 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 ADSSP30520 456 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 QARSP47897 775 aaKnown RBP16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 CYP1B1Q16678 543 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 TMEM174Q8WUU8 243 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 ART4Q93070 314 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 PRMT1Q99873 361 aaKnown RBP16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 HAUS2Q9NVX0 235 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 PARP2Q9UGN5 583 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 MTUS1Q9ULD2 1270 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 CCPG1Q9ULG6 757 aa16.61■□□□□ 0.25
GTF3C1-205ENST00000564747 CYP1A2P05177 515 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 CYP11B1P15538 503 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 YWHABP31946 246 aaKnown RBP16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 HSD17B4P51659 736 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 ADCY2Q08462 1091 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 UGCGQ16739 394 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 CCDC38Q502W7 563 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 SHC3Q92529 594 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 INTS9Q9NV88 658 aaKnown RBP16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 CLDN3O15551 220 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 AGTP01019 485 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 CALCAP01258 141 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 RARGP13631 454 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 MFAP3P55082 362 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 LRRC34Q8IZ02 419 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 KIFC3Q9BVG8 833 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
GTF3C1-205ENST00000564747 TOPORSQ9NS56 1045 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms