RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 FSCN1Q16658 493 aaKnown RBP6.09□□□□□ -1.43
CHD9-212ENST00000564641 PITRM1Q5JRX3 1037 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 RAX2Q96IS3 184 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 TTC1Q99614 292 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 TOR3AQ9H497 397 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 IFT22Q9H7X7 185 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 CYP4F11Q9HBI6 524 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 SPON1Q9HCB6 807 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 TRPM5Q9NZQ8 1165 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 LCHNA4D1U4 455 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 TBKBP1A7MCY6 615 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 AHRRA9YTQ3 701 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 ITGA10O75578 1167 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 HLA-DOAP06340 250 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 SPATA31D3P0C874 917 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 RBP3P10745 1247 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 APOBEC3AP31941 199 aaPredicted RBP6.08□□□□□ -1.44
CHD9-212ENST00000564641 CRHR1P34998 444 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 COL10A1Q03692 680 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 TRIM25Q14258 630 aaKnown RBP6.08□□□□□ -1.44
CHD9-212ENST00000564641 UGT8Q16880 541 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 EFCAB12Q6NXP0 572 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 FAM180AQ6UWF9 173 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 SPATA31D4Q6ZUB0 917 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 DDX46Q7L014 1031 aaKnown RBP6.08□□□□□ -1.44
CHD9-212ENST00000564641 VRK3Q8IV63 474 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 KCTD10Q9H3F6 313 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 MS4A5Q9H3V2 200 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 GPRC5DQ9NZD1 345 aa6.08□□□□□ -1.44
CHD9-212ENST00000564641 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 TMEM200CA6NKL6 621 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 CTSSP25774 331 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 ADRA1BP35368 520 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 BMPR1AP36894 532 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 LGALS4P56470 323 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 ARMC6Q6NXE6 501 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 XYLT1Q86Y38 959 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 LILRA3Q8N6C8 439 aaPredicted RBP6.07□□□□□ -1.44
CHD9-212ENST00000564641 ZFP28Q8NHY6 868 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 ZNF480Q8WV37 535 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 AKIP1Q9NQ31 210 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 APOBEC2Q9Y235 224 aaKnown RBP6.07□□□□□ -1.44
CHD9-212ENST00000564641 CHST2Q9Y4C5 530 aa6.07□□□□□ -1.44
CHD9-212ENST00000564641 TMEM127O75204 238 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 LMNAP02545 664 aaKnown RBP6.06□□□□□ -1.44
CHD9-212ENST00000564641 BMP5P22003 454 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 AVPR1BP47901 424 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 USP14P54578 494 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 BLOC1S1P78537 153 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 MXRA7P84157 204 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 NHLH2Q02577 135 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 FAPQ12884 760 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 BMT2Q1RMZ1 405 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 ABHD15Q6UXT9 468 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 ARHGEF19Q8IW93 802 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 OR10H5Q8NGA6 315 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 POGKQ9P215 609 aa6.06□□□□□ -1.44
CHD9-212ENST00000564641 GRID2IPA4D2P6 1211 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 PJA2O43164 708 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 MTHFD2P13995 350 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 ZSCAN20P17040 1043 aaPredicted RBP6.05□□□□□ -1.44
CHD9-212ENST00000564641 ENPP1P22413 925 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 PROZP22891 400 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 FLT3LGP49771 235 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 TFAP2CQ92754 450 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
CHD9-212ENST00000564641 ZNF768Q9H5H4 540 aaKnown RBP6.05□□□□□ -1.44
CHD9-212ENST00000564641 ZMYM3Q14202 1370 aa6.05□□□□□ -1.44
CHD9-212ENST00000564641 COL4A3Q01955 1670 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 CENPVL1A0A0U1RR11 272 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 LEFTY2O00292 366 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 BRINP1O60477 761 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 NCR1O76036 304 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 LPLP06858 475 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 GYS2P54840 703 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 MRPS9P82933 396 aaKnown RBP6.04□□□□□ -1.44
CHD9-212ENST00000564641 PDCD1Q15116 288 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHD9-212ENST00000564641 CT83Q5H943 113 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 RNF180Q86T96 592 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 EAF2Q96CJ1 260 aaPredicted RBP6.04□□□□□ -1.44
CHD9-212ENST00000564641 COQ10AQ96MF6 247 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 SERHL2Q9H4I8 314 aa6.04□□□□□ -1.44
CHD9-212ENST00000564641 TOPORSQ9NS56 1045 aaPredicted RBP6.04□□□□□ -1.44
CHD9-212ENST00000564641 NEMP1O14524 444 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 ZFP36P26651 326 aaKnown RBP6.03□□□□□ -1.44
CHD9-212ENST00000564641 SOX5P35711 763 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 RNASE9P60153 205 aaKnown RBP6.03□□□□□ -1.44
CHD9-212ENST00000564641 FAM189BP81408 668 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 MST1LQ2TV78 715 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 HECTD2Q5U5R9 776 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 DPY19L2P1Q6NXN4 242 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 BTNL9Q6UXG8 535 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 HDGFL2Q7Z4V5 671 aaPredicted RBP6.03□□□□□ -1.44
CHD9-212ENST00000564641 LCORLQ8N3X6 602 aa6.03□□□□□ -1.44
CHD9-212ENST00000564641 CLRN3Q8NCR9 226 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms