RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SLC16A4O15374 487 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 ALDH2P05091 517 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 CACNB1Q02641 598 aaPredicted RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 SMC1AQ14683 1233 aaKnown RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 PUS10Q3MIT2 529 aaKnown RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 ATF7IP2Q5U623 682 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 FOXD4L5Q5VV16 416 aaPredicted RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 DDX53Q86TM3 631 aaKnown RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 GPBP1Q86WP2 473 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 VPS52Q8N1B4 723 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 FOXD4L4Q8WXT5 416 aaPredicted RBP33.84■■■■□ 3.01
CMTM4-204ENST00000563952 EPSTI1Q96J88 318 aa33.84■■■■□ 3.01
CMTM4-204ENST00000563952 TNFRSF10AO00220 468 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 IL9P15248 144 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 DUSP6Q16828 381 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 USP49Q70CQ1 688 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 CLIC6Q96NY7 704 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 CDCA3Q99618 268 aaPredicted RBP33.83■■■■□ 3.01
CMTM4-204ENST00000563952 BLOC1S4Q9NUP1 217 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 SNTG2Q9NY99 539 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 ARHGAP28Q9P2N2 729 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 RBM19Q9Y4C8 960 aaKnown RBP33.83■■■■□ 3.01
CMTM4-204ENST00000563952 SRPRBQ9Y5M8 271 aaKnown RBP33.83■■■■□ 3.01
CMTM4-204ENST00000563952 MYH15Q9Y2K3 1946 aa33.83■■■■□ 3.01
CMTM4-204ENST00000563952 GRXCR2A6NFK2 248 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 NRP1O14786 923 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 PLS3P13797 630 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 OR1G1P47890 313 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 MCM6Q14566 821 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 BMS1Q14692 1282 aaKnown RBP33.82■■■■□ 3
CMTM4-204ENST00000563952 ARSHQ5FYA8 562 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 COLGALT2Q8IYK4 626 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 RAD54LQ92698 747 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 RPS6KC1Q96S38 1066 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 CCSER1Q9C0I3 900 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 TMEM134Q9H6X4 195 aa33.82■■■■□ 3
CMTM4-204ENST00000563952 PRG3Q9Y2Y8 225 aaPredicted RBP33.82■■■■□ 3
CMTM4-204ENST00000563952 GLP2RO95838 553 aa33.81■■■■□ 3
CMTM4-204ENST00000563952 RBM10P98175 930 aaKnown RBP33.81■■■■□ 3
CMTM4-204ENST00000563952 DCAF4L1Q3SXM0 396 aa33.81■■■■□ 3
CMTM4-204ENST00000563952 GSTCDQ8NEC7 633 aa33.81■■■■□ 3
CMTM4-204ENST00000563952 ZBP1Q9H171 429 aa33.81■■■■□ 3
CMTM4-204ENST00000563952 BARX2Q9UMQ3 279 aaPredicted RBP33.81■■■■□ 3
CMTM4-204ENST00000563952 CXCL14O95715 111 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 SMTNP53814 917 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 DSC1Q08554 894 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 SLC39A14Q15043 492 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 TAS1R3Q7RTX0 852 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 MRPL43Q8N983 215 aaKnown RBP33.8■■■■□ 3
CMTM4-204ENST00000563952 SPIRE2Q8WWL2 714 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 AUTS2Q8WXX7 1259 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 MRPL4Q9BYD3 311 aaKnown RBP33.8■■■■□ 3
CMTM4-204ENST00000563952 CLEC1BQ9P126 229 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 CD207Q9UJ71 328 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 GDAQ9Y2T3 454 aa33.8■■■■□ 3
CMTM4-204ENST00000563952 C2orf71A6NGG8 1288 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 RECQL4O94761 1208 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 KRT18P05783 430 aaKnown RBP33.79■■■■□ 3
CMTM4-204ENST00000563952 GRIK3Q13003 919 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 APBB1IPQ7Z5R6 666 aaPredicted RBP33.79■■■■□ 3
CMTM4-204ENST00000563952 VN1R2Q8NFZ6 395 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 ACO2Q99798 780 aaKnown RBP33.79■■■■□ 3
CMTM4-204ENST00000563952 REEP2Q9BRK0 252 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 VN1R3Q9BXE9 311 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 KCNG1Q9UIX4 513 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 FAM50BQ9Y247 325 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 TNFSF13BQ9Y275 285 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 ZMYM2Q9UBW7 1377 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 TTC28Q96AY4 2481 aa33.79■■■■□ 3
CMTM4-204ENST00000563952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP33.78■■■■□ 3
CMTM4-204ENST00000563952 FSD2A1L4K1 749 aa33.78■■■■□ 3
CMTM4-204ENST00000563952 NR1I2O75469 434 aa33.78■■■■□ 3
CMTM4-204ENST00000563952 STK38Q15208 465 aa33.78■■■■□ 3
CMTM4-204ENST00000563952 LLGL2Q6P1M3 1020 aa33.78■■■■□ 3
CMTM4-204ENST00000563952 LARP4BQ92615 738 aaKnown RBP33.78■■■■□ 3
CMTM4-204ENST00000563952 NTPCRQ9BSD7 190 aaKnown RBP33.78■■■■□ 3
CMTM4-204ENST00000563952 TARS2Q9BW92 718 aaKnown RBP33.78■■■■□ 3
CMTM4-204ENST00000563952 CCDC39Q9UFE4 941 aa33.78■■■■□ 3
CMTM4-204ENST00000563952 TXLNAP40222 546 aa33.77■■■■□ 3
CMTM4-204ENST00000563952 STRN3Q13033 797 aa33.77■■■■□ 3
CMTM4-204ENST00000563952 KRI1Q8N9T8 703 aaKnown RBP33.77■■■■□ 3
CMTM4-204ENST00000563952 MSLNLQ96KJ4 702 aa33.77■■■■□ 3
CMTM4-204ENST00000563952 ZNF396Q96N95 335 aaPredicted RBP33.77■■■■□ 3
CMTM4-204ENST00000563952 MARCH5Q9NX47 278 aa33.77■■■■□ 3
CMTM4-204ENST00000563952 LARSQ9P2J5 1176 aaKnown RBP33.77■■■■□ 3
CMTM4-204ENST00000563952 TFIP11Q9UBB9 837 aaKnown RBP33.77■■■■□ 3
CMTM4-204ENST00000563952 ODF2LQ9ULJ1 636 aa33.77■■■■□ 3
CMTM4-204ENST00000563952 CTSAP10619 480 aa33.76■■■□□ 2.99
CMTM4-204ENST00000563952 NASPP49321 788 aaPredicted RBP33.76■■■□□ 2.99
CMTM4-204ENST00000563952 ZNF568Q3ZCX4 644 aa33.76■■■□□ 2.99
CMTM4-204ENST00000563952 ZBTB33Q86T24 672 aa33.76■■■□□ 2.99
CMTM4-204ENST00000563952 TMEM87AQ8NBN3 555 aa33.76■■■□□ 2.99
CMTM4-204ENST00000563952 TMEM161BQ8NDZ6 487 aa33.76■■■□□ 2.99
CMTM4-204ENST00000563952 MBTPS2O43462 519 aa33.75■■■□□ 2.99
CMTM4-204ENST00000563952 FAM13AO94988 1023 aa33.75■■■□□ 2.99
CMTM4-204ENST00000563952 SRGAP2BP0DMP2 458 aa33.75■■■□□ 2.99
CMTM4-204ENST00000563952 ZSCAN22P10073 491 aaPredicted RBP33.75■■■□□ 2.99
CMTM4-204ENST00000563952 DDIT3P35638 169 aa33.75■■■□□ 2.99
CMTM4-204ENST00000563952 SMAD4Q13485 552 aaKnown RBP33.75■■■□□ 2.99
CMTM4-204ENST00000563952 TCHPQ9BT92 498 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms