RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 SMAP1Q8IYB5 467 aaPredicted RBP20.3■□□□□ 0.84
E4F1-203ENST00000563643 ZNF687Q8N1G0 1237 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 BRF1Q92994 677 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 B3GALT6Q96L58 329 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 IER2Q9BTL4 223 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 ANO3Q9BYT9 981 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 RBM28Q9NW13 759 aaKnown RBP20.3■□□□□ 0.84
E4F1-203ENST00000563643 NDRG2Q9UN36 371 aaKnown RBP20.3■□□□□ 0.84
E4F1-203ENST00000563643 PCDHB2Q9Y5E7 798 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
E4F1-203ENST00000563643 FAM86B1E9PN63 330 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 HRO43593 1189 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 FAM86B2P0C5J1 330 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 SREBF1P36956 1147 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 OR1G1P47890 313 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 CCR3P51677 355 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 SRSF5Q13243 272 aaKnown RBP20.29■□□□□ 0.84
E4F1-203ENST00000563643 RTN1Q16799 776 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 C8orf34Q49A92 452 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 PLA2G4DQ86XP0 818 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.29■□□□□ 0.84
E4F1-203ENST00000563643 CHST7Q9NS84 486 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 TCEAL9Q9UHQ7 104 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 PCDHA10Q9Y5I2 948 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 ITPR1Q14643 2758 aa20.29■□□□□ 0.84
E4F1-203ENST00000563643 A0A087WZ62 844 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 GOLGA8AA7E2F4 631 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 GOLGA8BA8MQT2 603 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 KCNK5O95279 499 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 SEC24BO95487 1268 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 FOSP01100 380 aaPredicted RBP20.28■□□□□ 0.84
E4F1-203ENST00000563643 OATP04181 439 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 SF3A2Q15428 464 aaKnown RBP20.28■□□□□ 0.84
E4F1-203ENST00000563643 ITFG1Q8TB96 612 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 FDXACB1Q9BRP7 624 aaPredicted RBP20.28■□□□□ 0.84
E4F1-203ENST00000563643 LHX6Q9UPM6 363 aa20.28■□□□□ 0.84
E4F1-203ENST00000563643 CNTNAP2Q9UHC6 1331 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 ASH1LQ9NR48 2969 aaKnown RBP20.27■□□□□ 0.84
E4F1-203ENST00000563643 NID2Q14112 1375 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 SRRM3A6NNA2 597 aaPredicted RBP20.27■□□□□ 0.84
E4F1-203ENST00000563643 F8W810 466 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 ZNF862O60290 1169 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 RPL17P18621 184 aaKnown RBP20.27■□□□□ 0.84
E4F1-203ENST00000563643 EVCP57679 992 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 CDC42EP1Q00587 391 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 RING1Q06587 406 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 CATSPER4Q7RTX7 472 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 COLGALT2Q8IYK4 626 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 C12orf50Q8NA57 414 aaPredicted RBP20.27■□□□□ 0.84
E4F1-203ENST00000563643 MBOAT7Q96N66 472 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 INO80BQ9C086 356 aaPredicted RBP20.27■□□□□ 0.84
E4F1-203ENST00000563643 RXFP3Q9NSD7 469 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 TBC1D22BQ9NU19 505 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 FNIP2Q9P278 1114 aa20.27■□□□□ 0.84
E4F1-203ENST00000563643 DMXL2Q8TDJ6 3036 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 IGLV3-22A0A075B6J6 115 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 TMEM8BA6NDV4 472 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 CHURC1-FNTBB4DL54 471 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 HNRNPA1P09651 372 aaKnown RBP eCLIP20.26■□□□□ 0.83
E4F1-203ENST00000563643 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 CNR2P34972 360 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 FNTBP49356 437 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 SATB1Q01826 763 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 PRKCEQ02156 737 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 FUT2Q10981 343 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 MRPL10Q7Z7H8 261 aaKnown RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 NPAS3Q8IXF0 933 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 ZNF577Q9BSK1 485 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 NRBP2Q9NSY0 501 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 FBXW11Q9UKB1 542 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
E4F1-203ENST00000563643 MYH9P35579 1960 aaKnown RBP20.26■□□□□ 0.83
E4F1-203ENST00000563643 AKAP13Q12802 2813 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 CCDC196A0A1B0GTZ2 297 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 MAN2B1O00754 1011 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 CXCL12P48061 93 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 TOB2Q14106 344 aaPredicted RBP20.25■□□□□ 0.83
E4F1-203ENST00000563643 STPG1Q5TH74 334 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 PSAPL1Q6NUJ1 521 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 AGPAT5Q9NUQ2 364 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 POLIQ9UNA4 740 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
E4F1-203ENST00000563643 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 LOC400499M0QZD8 3231 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 F5P12259 2224 aa20.25■□□□□ 0.83
E4F1-203ENST00000563643 RALGAPA1Q6GYQ0 2036 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 DOCK6Q96HP0 2047 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 ECI2O75521 394 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 CDC27P30260 824 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 NAPAP54920 295 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 CREMQ03060 361 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 USP41Q3LFD5 358 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 PPM1LQ5SGD2 360 aa20.24■□□□□ 0.83
E4F1-203ENST00000563643 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms