RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PROKR1Q8TCW9 393 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 CEP95Q96GE4 821 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 FAM193BQ96PV7 902 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 CDC5LQ99459 802 aaKnown RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 KRTAP17-1Q9BYP8 105 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 APOBEC2Q9Y235 224 aaKnown RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 TMEM191CA6NGB0 347 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 ADCY6O43306 1168 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 ABHD16AO95870 558 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 ENPP1P22413 925 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 CDK17Q00537 523 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 TAF7LQ5H9L4 462 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 LAIR1Q6GTX8 287 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 GIMAP6Q6P9H5 292 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 KCNV1Q6PIU1 500 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 BTNL9Q6UXG8 535 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 SYT12Q8IV01 421 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 CMIPQ8IY22 773 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 SPON1Q9HCB6 807 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 GPRC5DQ9NZD1 345 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 TRPM5Q9NZQ8 1165 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 DPP7Q9UHL4 492 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
HMGB1P33-201ENST00000563485 LPXNO60711 386 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 CCT2P78371 535 aaKnown RBP4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 COL10A1Q03692 680 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 TIGD2Q4W5G0 525 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 LY6G5CQ5SRR4 150 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 PRAMEF14Q5SWL7 426 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 MBNL2Q5VZF2 373 aaKnown RBP4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 IQSEC1Q6DN90 963 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 GDF7Q7Z4P5 450 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 RNF169Q8NCN4 708 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 OR10H5Q8NGA6 315 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 TGFBRAP1Q8WUH2 860 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 ZNF480Q8WV37 535 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 ACAP3Q96P50 834 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 TEX101Q9BY14 249 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 CAAP1Q9H8G2 361 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 VTA1Q9NP79 307 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 CHST2Q9Y4C5 530 aa4.7□□□□□ -1.66
HMGB1P33-201ENST00000563485 CENPVL1A0A0U1RR11 272 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 B5MCH6 92 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 NCR1O76036 304 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 LAG3P18627 525 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 HSD3B2P26439 372 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 SOX5P35711 763 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 RNASE9P60153 205 aaKnown RBP4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 NHLH2Q02577 135 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 PTPAQ15257 358 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 MST1LQ2TV78 715 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 MFSD14BQ5SR56 506 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 AFAP1L2Q8N4X5 818 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 REPS2Q8NFH8 660 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 TSPEARQ8WU66 669 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 RIN2Q8WYP3 895 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 RAX2Q96IS3 184 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 QRSL1Q9H0R6 528 aaKnown RBP4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 SLKQ9H2G2 1235 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 TMA7Q9Y2S6 64 aaKnown RBP4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 RPTORQ8N122 1335 aa4.69□□□□□ -1.66
HMGB1P33-201ENST00000563485 GRID2IPA4D2P6 1211 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 GOLGA8AA7E2F4 631 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 TBKBP1A7MCY6 615 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 ZNF185O15231 689 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 PPFIA4O75335 1185 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 ZSCAN20P17040 1043 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 PROZP22891 400 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 ADSLP30566 484 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 CRHR1P34998 444 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 MASP1P48740 699 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 TMPRSS15P98073 1019 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 SDE2Q6IQ49 451 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 EFCAB12Q6NXP0 572 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 DRICH1Q6PGQ1 229 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 PDZD4Q76G19 769 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 FBXO18Q8NFZ0 1043 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 LMBR1Q8WVP7 490 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 TFAP2CQ92754 450 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 ZG16BQ96DA0 208 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 PAWRQ96IZ0 340 aaKnown RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 DCLRE1CQ96SD1 692 aaKnown RBP4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 AKIP1Q9NQ31 210 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 ANKFY1Q9P2R3 1169 aa4.68□□□□□ -1.66
HMGB1P33-201ENST00000563485 RNASET2O00584 256 aaKnown RBP4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 WNT10BO00744 389 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 AKR1B10O60218 316 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 BRINP1O60477 761 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 GASTP01350 101 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 GCP02774 474 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 FLT3LGP49771 235 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 SCAND1P57086 179 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 MRPS9P82933 396 aaKnown RBP4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 STAT4Q14765 748 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 BMT2Q1RMZ1 405 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 PDCD4Q53EL6 469 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms