RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GLUD2P49448 558 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 DSG1Q02413 1049 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 TDGQ13569 410 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 TFDP1Q14186 410 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 CALCRLQ16602 461 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 NSUN7Q8NE18 718 aaKnown RBP18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 NFKBIZQ9BYH8 718 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 GPR62Q9BZJ7 368 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 CHST7Q9NS84 486 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 GIT1Q9Y2X7 761 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 PROB1E7EW31 1015 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 PI15O43692 258 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 NARSO43776 548 aaKnown RBP18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 JAK2O60674 1132 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 ADH1AP07327 375 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 TXKP42681 527 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 CLCN5P51795 746 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 FOSBP53539 338 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 ZNF707Q96C28 371 aaPredicted RBP18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 POLR3FQ9H1D9 316 aaPredicted RBP18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 TMEM60Q9H2L4 133 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 MFSD1Q9H3U5 465 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 GPRC5CQ9NQ84 441 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 DUSP12Q9UNI6 340 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 SSX2IPQ9Y2D8 614 aa18.66■□□□□ 0.58
HDGFL3-203ENST00000563404 POTEMA6NI47 508 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 NEMFO60524 1076 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 NPTXRO95502 500 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 GLUD1P00367 558 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 SPATA31C1P0DKV0 1188 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 ANAPC15P60006 121 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 ANKRD1Q15327 319 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 ASCL5Q7RTU5 278 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 DIS3L2Q8IYB7 885 aaKnown RBP18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 FLCNQ8NFG4 579 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 RSAD2Q8WXG1 361 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 BRMS1Q9HCU9 246 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 KLK14Q9P0G3 267 aa18.65■□□□□ 0.58
HDGFL3-203ENST00000563404 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.58
HDGFL3-203ENST00000563404 A0A1B0GUA9 196 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 TTLL13PA6NNM8 815 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 PAPLNO95428 1278 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 NCBP1Q09161 790 aaKnown RBP18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 SLC27A1Q6PCB7 646 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 PALB2Q86YC2 1186 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 MYADMQ96S97 322 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 PAAF1Q9BRP4 392 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 COLEC11Q9BWP8 271 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 RHOBTB2Q9BYZ6 727 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 TRIM6Q9C030 488 aaPredicted RBP18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 CLUHO75153 1309 aa18.64■□□□□ 0.57
HDGFL3-203ENST00000563404 TGM5O43548 720 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 RPL17P18621 184 aaKnown RBP18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 AOC1P19801 751 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 NBL1P41271 181 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 LILRA6Q6PI73 481 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 SMG7Q92540 1137 aaKnown RBP18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 CXCL16Q9H2A7 254 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 PARP2Q9UGN5 583 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 ADAM28Q9UKQ2 775 aa18.63■□□□□ 0.57
HDGFL3-203ENST00000563404 MED24O75448 989 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 NR1I2O75469 434 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 XRCC6P12956 609 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 GBP2P32456 591 aaPredicted RBP18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 GRIK3Q13003 919 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 CDCA2Q69YH5 1023 aaPredicted RBP18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 CATSPER3Q86XQ3 398 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 GLYCTKQ8IVS8 523 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 SIX5Q8N196 739 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 HDAC7Q8WUI4 952 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 CCDC43Q96MW1 224 aaKnown RBP18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 NT5C3AQ9H0P0 336 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 FNIP2Q9P278 1114 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 IGSF9Q9P2J2 1179 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 EPS15L1Q9UBC2 864 aa18.62■□□□□ 0.57
HDGFL3-203ENST00000563404 ZMYM2Q9UBW7 1377 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 PRR23AA6NEV1 266 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 LRRIQ4A6NIV6 560 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 EDN1P05305 212 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 USP41Q3LFD5 358 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 RTP2Q5QGT7 225 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 HACE1Q8IYU2 909 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 RIN2Q8WYP3 895 aaPredicted RBP18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 BSNDQ8WZ55 320 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 FZD8Q9H461 694 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 DPP7Q9UHL4 492 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms