RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OSBPL7Q9BZF2 842 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 LRRC19Q9H756 370 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 KLC4Q9NSK0 619 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 SMCHD1A6NHR9 2005 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 CTNND1O60716 968 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 CHN1P15882 459 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ITGB5P18084 799 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ITIH4Q14624 930 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TTC27Q6P3X3 843 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 TAOK1Q7L7X3 1001 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 C4orf19Q8IY42 314 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 FAM81BQ96LP2 452 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ZNF317Q96PQ6 595 aaPredicted RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TMEM110-MUSTN1A8MSY1 372 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 CHUKO15111 745 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 RIPK2O43353 540 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 SPOPO43791 374 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 ICAM1P05362 532 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 MMEP08473 750 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 PYGMP11217 842 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 GTF2H1P32780 548 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 MAN1A1P33908 653 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 PTGER2P43116 358 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 GPC3P51654 580 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 FMO1Q01740 532 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 CDR2Q01850 454 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 SIX1Q15475 284 aaPredicted RBP14.05□□□□□ -0.16
USB1-207ENST00000563149 KRT39Q6A163 491 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 MFSD5Q6N075 450 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 AADACL2Q6P093 401 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 SYDE1Q6ZW31 735 aaPredicted RBP14.05□□□□□ -0.16
USB1-207ENST00000563149 CCDC91Q7Z6B0 441 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 USP37Q86T82 979 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 CCDC105Q8IYK2 499 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 PLEKHO2Q8TD55 490 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 TMC2Q8TDI7 906 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 IPO4Q8TEX9 1081 aaKnown RBP14.05□□□□□ -0.16
USB1-207ENST00000563149 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
USB1-207ENST00000563149 CCT6BQ92526 530 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 NUP85Q9BW27 656 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 AZI2Q9H6S1 392 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 AGO4Q9HCK5 861 aaKnown RBP14.05□□□□□ -0.16
USB1-207ENST00000563149 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 SLC40A1Q9NP59 571 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 ANKEF1Q9NU02 776 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 WHRNQ9P202 907 aa14.05□□□□□ -0.16
USB1-207ENST00000563149 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 FSCN2O14926 492 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 DNAJC8O75937 253 aaPredicted RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 ECEL1O95672 775 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 GSTA1P08263 222 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 MARCKSL1P49006 195 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PDE6CP51160 858 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 AOC3Q16853 763 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 FKBP1CQ5VVH2 108 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 ACAD10Q6JQN1 1059 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 KRT27Q7Z3Y8 459 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PIGWQ7Z7B1 504 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 ZDHHC14Q8IZN3 488 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 MDM1Q8TC05 714 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 KREMEN1Q96MU8 473 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 SELENOSQ9BQE4 189 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 NSRP1Q9H0G5 558 aaKnown RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 ADAM7Q9H2U9 754 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 LRRC4CQ9HCJ2 640 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 INTS9Q9NV88 658 aaKnown RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 TLDC2A0PJX2 215 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 TCP10L2B9ZVM9 353 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 DDX39AO00148 427 aaKnown RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 RASGRF2O14827 1237 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 CYP26A1O43174 497 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 RARAP10276 462 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 ATP5DP30049 168 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 CAP2P40123 477 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 CALCOCO2Q13137 446 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 XRCC4Q13426 336 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 ENOSF1Q7L5Y1 443 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PPM1KQ8N3J5 372 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms