RNA–Protein interactions for RNA: ENST00000563054.1

AC237221.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC237221.1, Length 2,947 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC237221.1-202ENST00000563054 SHOX2O60902 331 aaPredicted RBP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 SOX5P35711 763 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 CBWD2Q8IUF1 395 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 IFT20Q8IY31 132 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 REPS2Q8NFH8 660 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 PLEKHO2Q8TD55 490 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 TOPORSQ9NS56 1045 aaPredicted RBP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
AC237221.1-202ENST00000563054 WDR64B1ANS9 1081 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 FSBPO95073 299 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 COPB2P35606 906 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 MAGEA8P43361 318 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 HLTFQ14527 1009 aaKnown RBP eCLIP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 MTERF2Q49AM1 385 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 VPS36Q86VN1 386 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ANKRD35Q8N283 1001 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 SLC20A1Q8WUM9 679 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ELP3Q9H9T3 547 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 HSF2BPO75031 334 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 CCND2P30279 289 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 PSMC5P62195 406 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ERVK-9P63128 1117 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 HHATQ5VTY9 493 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ZNF746Q6NUN9 644 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 EMBQ6PCB8 327 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 CATSPERGQ6ZRH7 1159 aa13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 ZNF668Q96K58 619 aaPredicted RBP13.68□□□□□ -0.22
AC237221.1-202ENST00000563054 BUB1BO60566 1050 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PLS3P13797 630 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 FERP16591 822 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 ATP1A2P50993 1020 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 BFSP1Q12934 665 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 APOBEC3FQ8IUX4 373 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 BCAS4Q8TDM0 211 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 HSPBP1Q9NZL4 362 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 NENFQ9UMX5 172 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 RPSAP08865 295 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 SETSIPP0DME0 302 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 IRAK1P51617 712 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 SLC35G2Q8TBE7 412 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 THAP2Q9H0W7 228 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 UBE2TQ9NPD8 197 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 AMACRQ9UHK6 382 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PPP1R37O75864 691 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 ADRB2P07550 413 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PYGBP11216 843 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 NPTX2P47972 431 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 PAK2Q13177 524 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 THEMIS2Q5TEJ8 643 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 DMAC2Q9NW81 257 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 RNF14Q9UBS8 474 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 APEX2Q9UBZ4 518 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 AFG3L2Q9Y4W6 797 aa13.67□□□□□ -0.22
AC237221.1-202ENST00000563054 KIAA1217Q5T5P2 1943 aa13.66□□□□□ -0.22
AC237221.1-202ENST00000563054 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
AC237221.1-202ENST00000563054 KRIT1O00522 736 aa13.66□□□□□ -0.22
AC237221.1-202ENST00000563054 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
AC237221.1-202ENST00000563054 TNNC1P63316 161 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms