RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LGALS2P05162 132 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 RFX1P22670 979 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 KLRC1P26715 233 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 MAPK4P31152 587 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 NAB2Q15742 525 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ALKBH5Q6P6C2 394 aaKnown RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 SV2AQ7L0J3 742 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 RASAL3Q86YV0 1011 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 RNF149Q8NC42 400 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 NPLOC4Q8TAT6 608 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 TAS1R2Q8TE23 839 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 AFG1LQ8WV93 481 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 UBXN4Q92575 508 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ZNFX1Q9P2E3 1918 aaKnown RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 A0A0B4J269 797 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CCDC66A2RUB6 948 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 HBP1O60381 514 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF286BP0CG31 522 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF157P51786 506 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 LMBRD2Q68DH5 695 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 RSRC2Q7L4I2 434 aaKnown RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 RHPN2Q8IUC4 686 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 KRT222Q8N1A0 295 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 TXLNBQ8N3L3 684 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 PPTC7Q8NI37 304 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 TCP11Q8WWU5 503 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SYT11Q9BT88 431 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 LUC7LQ9NQ29 371 aaKnown RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SUCLA2Q9P2R7 463 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 COQ4Q9Y3A0 265 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 DAAM1Q9Y4D1 1078 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ANO9A1A5B4 782 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 GAS2O43903 313 aaKnown RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 MSCO60682 206 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SMPD1P17405 629 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CAPN2P17655 700 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ANXA13P27216 316 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 GTF2H1P32780 548 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CLCN3P51790 818 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 NAP1L1P55209 391 aaKnown RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CHMP4BP1P59074 171 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 IGBP1P78318 339 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 MXD4Q14582 209 aaPredicted RBP10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SEZ6Q53EL9 994 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 GLYCTKQ8IVS8 523 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SLC30A5Q8TAD4 765 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 NOX5Q96PH1 765 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 KIAA1586Q9HCI6 787 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 JRKLQ9Y4A0 524 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 SAR1BQ9Y6B6 198 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 PLXNB2O15031 1838 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 ADGRA2Q96PE1 1338 aa10.18□□□□□ -0.78
LINC00838-201ENST00000562956 PCNTO95613 3336 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 GPC3P51654 580 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 EFNA5P52803 228 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 KIF22Q14807 665 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 PSMD6Q15008 389 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 WHAMMP3Q1A5X7 153 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 TEX35Q5T0J7 233 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 EFCAB12Q6NXP0 572 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 USP37Q86T82 979 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 VPS36Q86VN1 386 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 EXOC8Q8IYI6 725 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 RNF10Q8N5U6 811 aaKnown RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 METTL13Q8N6R0 699 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 CEP112Q8N8E3 955 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 FBXL13Q8NEE6 735 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 EMID1Q96A84 441 aaPredicted RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 KREMEN1Q96MU8 473 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 ALS2CR12Q96Q35 445 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 PDE11AQ9HCR9 933 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 RAB20Q9NX57 234 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 PTPRJQ12913 1337 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 KIAA0391O15091 583 aaKnown RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF185O15231 689 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 ADCY6O43306 1168 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 C22orf31O95567 290 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 HARSP12081 509 aaKnown RBP10.17□□□□□ -0.78
LINC00838-201ENST00000562956 INSRRP14616 1297 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 CLDN10P78369 228 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 ENPEPQ07075 957 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 C10orf76Q5T2E6 689 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 C15orf39Q6ZRI6 1047 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
LINC00838-201ENST00000562956 U2AF1L4Q8WU68 220 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms