RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 DDIT3P35638 169 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 NPTX2P47972 431 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 PEX3P56589 373 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 UBE3AQ05086 875 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 DUSP6Q16828 381 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
CDT1-202ENST00000562747 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
CDT1-202ENST00000562747 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 PBXIP1Q96AQ6 731 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 PHF7Q9BWX1 381 aaPredicted RBP18.25■□□□□ 0.51
CDT1-202ENST00000562747 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
CDT1-202ENST00000562747 ODF2LQ9ULJ1 636 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 CCDC169A6NNP5 214 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 ACKR2O00590 384 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 B4GALT5O43286 388 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 PRKCBP05771 671 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 PLS3P13797 630 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
CDT1-202ENST00000562747 KCNC3Q14003 757 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 MCM6Q14566 821 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 ARSHQ5FYA8 562 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 PLPP4Q5VZY2 271 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 GPBP1Q86WP2 473 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 THNSL1Q8IYQ7 743 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 NTPCRQ9BSD7 190 aaKnown RBP18.24■□□□□ 0.51
CDT1-202ENST00000562747 KIFC3Q9BVG8 833 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 TMEM134Q9H6X4 195 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 KMT5AQ9NQR1 393 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 AAASQ9NRG9 546 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 ZDHHC9Q9Y397 364 aa18.24■□□□□ 0.51
CDT1-202ENST00000562747 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
CDT1-202ENST00000562747 N4BP3O15049 544 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 CUTAO60888 179 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 PBX3P40426 434 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 RAD51AP2Q09MP3 1159 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 TCF15Q12870 199 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 SLC27A1Q6PCB7 646 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 CCDC73Q6ZRK6 1079 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 LRRC55Q6ZSA7 311 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 SMG8Q8ND04 991 aaKnown RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 SPIRE2Q8WWL2 714 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 LPPQ93052 612 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 TRIM6Q9C030 488 aaPredicted RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 S1PR5Q9H228 398 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 UBN1Q9NPG3 1134 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 LARSQ9P2J5 1176 aaKnown RBP18.23■□□□□ 0.51
CDT1-202ENST00000562747 ARHGAP28Q9P2N2 729 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 CDH22Q9UJ99 828 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 IPPQ9Y573 584 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 USP34Q70CQ2 3546 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 ZDBF2Q9HCK1 2354 aa18.23■□□□□ 0.51
CDT1-202ENST00000562747 SFI1A8K8P3 1242 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 HIDE1A8MVS5 230 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 K7ERI5 159 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 OFD1O75665 1012 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 LAG3P18627 525 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 SMTNP53814 917 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 VCPP55072 806 aaKnown RBP18.22■□□□□ 0.51
CDT1-202ENST00000562747 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
CDT1-202ENST00000562747 AGMOQ6ZNB7 445 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 FBXL6Q8N531 539 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 REEP2Q9BRK0 252 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 APOL5Q9BWW9 433 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 RSAD1Q9HA92 442 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 MYH11P35749 1972 aa18.22■□□□□ 0.51
CDT1-202ENST00000562747 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 MEIS3P2A8K0S8 358 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 ITGA4P13612 1032 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 LIG1P18858 919 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 SP100P23497 879 aaPredicted RBP18.21■□□□□ 0.51
CDT1-202ENST00000562747 SIGLEC14Q08ET2 396 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 GIT2Q14161 759 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 TMEM132AQ24JP5 1023 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 LONRF3Q496Y0 759 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 NOMO2Q5JPE7 1267 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 ANKRD54Q6NXT1 300 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 SYCE2Q6PIF2 218 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
CDT1-202ENST00000562747 CDCA3Q99618 268 aaPredicted RBP18.21■□□□□ 0.51
CDT1-202ENST00000562747 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 PDZD7Q9H5P4 517 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
CDT1-202ENST00000562747 CARNS1A5YM72 827 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 TTLL13PA6NNM8 815 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 H0YCG3 227 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 SLC16A4O15374 487 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 FAM13AO94988 1023 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms