RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CCHCR1Q8TD31 782 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 MTMR8Q96EF0 704 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 SAAL1Q96ER3 474 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 CCDC188H7C350 402 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 GPC5P78333 572 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 LBX2Q6XYB7 198 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TOGARAM2Q6ZUX3 1019 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 CXorf38Q8TB03 319 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 CASZ1Q86V15 1759 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 OGTO15294 1046 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 NOGQ13253 232 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 MESDQ14696 234 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 HYIQ5T013 277 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 NOTUMQ6P988 496 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ARRDC4Q8NCT1 418 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TRAF3IP3Q9Y228 551 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ADGRG1Q9Y653 693 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
TCF4-216ENST00000562680 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.08□□□□□ -1.12
TCF4-216ENST00000562680 A6NJR5 290 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TRIM49P0CI25 452 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TRIM49CP0CI26 452 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 EHHADHQ08426 723 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ZNF720Q7Z2F6 126 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ZNF677Q86XU0 584 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 SIX6OS1Q8N1H7 587 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 CCDC89Q8N998 374 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TNIP3Q96KP6 325 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
TCF4-216ENST00000562680 ETAA1Q9NY74 926 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ADAM22Q9P0K1 906 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 NRAPQ86VF7 1730 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ANKRD36CQ5JPF3 1778 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TOM1L1O75674 476 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 PEX19P40855 299 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 RANBP1P43487 201 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 TSPY1Q01534 308 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 HEXIM2Q96MH2 286 aaKnown RBP8.08□□□□□ -1.12
TCF4-216ENST00000562680 TRIM4Q9C037 500 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 WDR35Q9P2L0 1181 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 C17orf102A2RUQ5 167 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 EBAG9O00559 213 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SLITRK3O94933 977 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 AKR1A1P14550 325 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 APBA1Q02410 837 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 MUM1L1Q5H9M0 696 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SH2D4BQ5SQS7 431 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 KLHL7Q8IXQ5 586 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 OR6B3Q8NGW1 331 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 ZNF507Q8TCN5 953 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.12
TCF4-216ENST00000562680 CAND2O75155 1236 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 CD58P19256 250 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 ADORA2AP29274 412 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PNPLA4P41247 253 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 FAM110CQ1W6H9 321 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 COBLL1Q53SF7 1204 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 KIAA1841Q6NSI8 718 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 ZPBP2Q6X784 338 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TAOK1Q7L7X3 1001 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 EFCAB13Q8IY85 973 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TJP1Q07157 1748 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TRAPPC3O43617 180 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 USP2O75604 605 aaPredicted RBP8.07□□□□□ -1.12
TCF4-216ENST00000562680 UCHL3P15374 230 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 NPTX2P47972 431 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 RTP1P59025 263 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TMEM132DQ14C87 1099 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SH3D19Q5HYK7 790 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TAF2Q6P1X5 1199 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 FBXO16Q8IX29 292 aaPredicted RBP8.07□□□□□ -1.12
TCF4-216ENST00000562680 KIF12Q96FN5 646 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SLC12A6Q9UHW9 1150 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PIN4Q9Y237 131 aaKnown RBP8.07□□□□□ -1.12
TCF4-216ENST00000562680 FAM169AQ9Y6X4 670 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SNED1Q8TER0 1413 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PABPN1LA6NDY0 278 aaKnown RBP8.07□□□□□ -1.12
TCF4-216ENST00000562680 SH3BP5O60239 455 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PGK2P07205 417 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 SEPT6Q14141 434 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 PCBP1Q15365 356 aaKnown RBP eCLIP8.07□□□□□ -1.12
TCF4-216ENST00000562680 CCDC38Q502W7 563 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 TMEM270Q6UE05 265 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 RSAD2Q8WXG1 361 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 RFFLQ8WZ73 363 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 HPS3Q969F9 1004 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 FAM149B1Q96BN6 582 aa8.07□□□□□ -1.12
TCF4-216ENST00000562680 INPP4AQ96PE3 977 aaPredicted RBP8.07□□□□□ -1.12
TCF4-216ENST00000562680 MTIF3Q9H2K0 278 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms