RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 EPHX3Q9H6B9 360 aa12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 BLOC1S4Q9NUP1 217 aa12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 SNTG2Q9NY99 539 aa12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 GIT1Q9Y2X7 761 aa12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 PRG3Q9Y2Y8 225 aaPredicted RBP12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
LPCAT4-202ENST00000562404 MTCL1Q9Y4B5 1905 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 TRIOO75962 3097 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 PTGESO14684 152 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 CLASP2O75122 1294 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 CXCL14O95715 111 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 PLA2G4BP0C869 781 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 CTSAP10619 480 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 IGFBP6P24592 240 aaPredicted RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 ZP2Q05996 745 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 NCBP1Q09161 790 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 COASYQ13057 564 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 SMAD4Q13485 552 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 PPP2R5AQ15172 486 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 RNF168Q8IYW5 571 aaPredicted RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 GJD3Q8N144 294 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 CEP120Q8N960 986 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 RSPH1Q8WYR4 309 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 IFT74Q96LB3 600 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 TMEM175Q9BSA9 504 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 APOL5Q9BWW9 433 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 S1PR5Q9H228 398 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 UBN1Q9NPG3 1134 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 ARHGAP28Q9P2N2 729 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 PARP2Q9UGN5 583 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 HCFC2Q9Y5Z7 792 aa12.23□□□□□ -0.45
LPCAT4-202ENST00000562404 MYO10Q9HD67 2058 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 DOCK6Q96HP0 2047 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 CCDC169A6NNP5 214 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ABLIM1O14639 778 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 N4BP3O15049 544 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 LILRB3O75022 631 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 RECQL4O94761 1208 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ALDH2P05091 517 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 GUCY2CP25092 1073 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 MARCKSP29966 332 aaPredicted RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 CA8P35219 290 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 OR1G1P47890 313 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 KARSQ15046 597 aaKnown RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 NAB2Q15742 525 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ATF7IP2Q5U623 682 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ANKRD54Q6NXT1 300 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 SNX21Q969T3 373 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 PTPRHQ9HD43 1115 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 USP15Q9Y4E8 981 aaPredicted RBP12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
LPCAT4-202ENST00000562404 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 PHLPP2Q6ZVD8 1323 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 K7ERI5 159 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 SLC16A4O15374 487 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 EPCAMP16422 314 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 PLCG1P19174 1290 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 PDCP20941 246 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 MCM6Q14566 821 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 ADHFE1Q8IWW8 467 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 SLC22A17Q8WUG5 538 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 SUSD6Q92537 303 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 EPSTI1Q96J88 318 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 B3GALT6Q96L58 329 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 AK8Q96MA6 479 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 NTPCRQ9BSD7 190 aaKnown RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 TARS2Q9BW92 718 aaKnown RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 GPR62Q9BZJ7 368 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 NT5C3AQ9H0P0 336 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 TMEM134Q9H6X4 195 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 C11orf16Q9NQ32 467 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 FBXO2Q9UK22 296 aaPredicted RBP12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 GDAQ9Y2T3 454 aa12.21□□□□□ -0.45
LPCAT4-202ENST00000562404 ANK1P16157 1881 aa12.21□□□□□ -0.46
LPCAT4-202ENST00000562404 STX6O43752 255 aa12.2□□□□□ -0.46
LPCAT4-202ENST00000562404 SOD2P04179 222 aa12.2□□□□□ -0.46
LPCAT4-202ENST00000562404 CNPP09543 421 aaKnown RBP12.2□□□□□ -0.46
LPCAT4-202ENST00000562404 PROZP22891 400 aa12.2□□□□□ -0.46
LPCAT4-202ENST00000562404 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms