RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 QRSL1Q9H0R6 528 aaKnown RBP3.28□□□□□ -1.88
CHD9-204ENST00000561869 KCNH6Q9H252 994 aa3.28□□□□□ -1.88
CHD9-204ENST00000561869 C14orf119Q9NWQ9 140 aa3.28□□□□□ -1.88
CHD9-204ENST00000561869 ATRNL1Q5VV63 1379 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 RPTORQ8N122 1335 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 AHRRA9YTQ3 701 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 ADCY6O43306 1168 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CLSTN1O94985 981 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 GASTP01350 101 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 KRT4P19013 534 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CANXP27824 592 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 MCM7P33993 719 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CRHR1P34998 444 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 MTNR1BP49286 362 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CCT2P78371 535 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 SRSF2Q01130 221 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 FAPQ12884 760 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 FHL2Q14192 279 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CT47A1Q5JQC4 288 aaPredicted RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 TOR2AQ5JU69 321 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 PRAMEF14Q5SWL7 426 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 RNF219Q5W0B1 726 aaPredicted RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 METRNLQ641Q3 311 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 PCSK4Q6UW60 755 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 MRGPREQ86SM8 312 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 SPATS2Q86XZ4 545 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 LDLRAD3Q86YD5 345 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 SYT12Q8IV01 421 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 REPS2Q8NFH8 660 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 GPR156Q8NFN8 814 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 MDM1Q8TC05 714 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 RIN2Q8WYP3 895 aaPredicted RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 HOXB13Q92826 284 aaPredicted RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 LENG9Q96B70 501 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 CLIP3Q96DZ5 547 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 AHCYL2Q96HN2 611 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 PAWRQ96IZ0 340 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 NDC1Q9BTX1 674 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 TRIM8Q9BZR9 551 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 TMX1Q9H3N1 280 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 ZNF768Q9H5H4 540 aaKnown RBP3.27□□□□□ -1.89
CHD9-204ENST00000561869 IFT122Q9HBG6 1241 aa3.27□□□□□ -1.89
CHD9-204ENST00000561869 TBKBP1A7MCY6 615 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 LEFTY2O00292 366 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 TRIM24O15164 1050 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 PHF2O75151 1096 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 RPS6KA4O75676 772 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 CPEP16870 476 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 MAKP20794 623 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 TGM1P22735 817 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 CNGA1P29973 690 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 ADSLP30566 484 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 FAM189BP81408 668 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 DPTQ07507 201 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 BMT2Q1RMZ1 405 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 ANO4Q32M45 955 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 INAVAQ3KP66 663 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 DRICH1Q6PGQ1 229 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 DDX42Q86XP3 938 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD9-204ENST00000561869 ULK2Q8IYT8 1036 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 TRMT2AQ8IZ69 625 aaKnown RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 CBARPQ8N350 705 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 ZNF276Q8N554 614 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 SLC35B2Q8TB61 432 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 SLC25A43Q8WUT9 341 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 ZNF480Q8WV37 535 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 NEU4Q8WWR8 484 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 FATE1Q969F0 183 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 CDC5LQ99459 802 aaKnown RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 EPC1Q9H2F5 836 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 GREM2Q9H772 168 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 DMRT3Q9NQL9 472 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 ZNF277Q9NRM2 450 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 CCM2LQ9NUG4 571 aaPredicted RBP3.26□□□□□ -1.89
CHD9-204ENST00000561869 FZD1Q9UP38 647 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 SORCS3Q9UPU3 1222 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 CHST2Q9Y4C5 530 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 HS3ST4Q9Y661 456 aa3.26□□□□□ -1.89
CHD9-204ENST00000561869 SBNO2Q9Y2G9 1366 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 PNPLA7Q6ZV29 1317 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 TRIM75PA6NK02 468 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 B5MCH6 92 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 AKR1B10O60218 316 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 SCAF4O95104 1147 aaKnown RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 ADH4P08319 380 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 MTHFD2P13995 350 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 ZSCAN20P17040 1043 aaPredicted RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 APOBEC3AP31941 199 aaPredicted RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 SREBF1P36956 1147 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 MCAMP43121 646 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 FLT3LGP49771 235 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 SEPT2Q15019 361 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 FAM47AQ5JRC9 791 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 ZNF572Q7Z3I7 529 aaPredicted RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 RPUSD2Q8IZ73 545 aaKnown RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 OR7D4Q8NG98 312 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 OR2I1PQ8NGU4 316 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 ATL2Q8NHH9 583 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 CPT1CQ8TCG5 803 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 HAS1Q92839 578 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms