RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 AP5Z1O43299 807 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 PHF2O75151 1096 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 SKAP2O75563 359 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 EIF2AK2P19525 551 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 TARSP26639 723 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 COPB2P35606 906 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 EXOSC10Q01780 885 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 CAPRIN1Q14444 709 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC18A3Q16572 532 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 P3H1Q32P28 736 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 SIX6OS1Q8N1H7 587 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 MXD3Q9BW11 206 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 L2HGDHQ9H9P8 463 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 DISP1Q96F81 1524 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 RWDD4Q6NW29 188 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 DGKHQ86XP1 1220 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 LRRC34Q8IZ02 419 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 LRRN4CLQ8ND94 238 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 ZNF507Q8TCN5 953 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 ACAP3Q96P50 834 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 NEMP1O14524 444 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 GGPS1O95749 300 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 USP49Q70CQ1 688 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC44A5Q8NCS7 719 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 MARK3P27448 753 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 MRPS15P82914 257 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 ALCAMQ13740 583 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 RNF217Q8TC41 542 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 TEKT4Q8WW24 435 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 AGPAT1Q99943 283 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 ADNPQ9H2P0 1102 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 TUBE1Q9UJT0 475 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 MMP10P09238 476 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 HSD17B3P37058 310 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 ROR1Q01973 937 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 HIF1AQ16665 826 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 KLF6Q99612 283 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 IL25Q9H293 177 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 DBNDD1Q9H9R9 158 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 TSC22D4Q9Y3Q8 395 aa10.81□□□□□ -0.68
GTF3C1-202ENST00000561623 XPO1O14980 1071 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TRPC1P48995 793 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 HDAC4P56524 1084 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 AP1B1Q10567 949 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TRIP10Q15642 601 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 EEPD1Q7L9B9 569 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 RNF135Q8IUD6 432 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 SGSM3Q96HU1 749 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 KBTBD13C9JR72 458 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ARHGEF9O43307 516 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MAP4P27816 1152 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CCND2P30279 289 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 THNSL1Q8IYQ7 743 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ELMOD1Q8N336 334 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TMEM35BQ8NCS4 154 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ARHGAP31Q2M1Z3 1444 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CDHR2Q9BYE9 1310 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 K7ERI5 159 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ANP32DO95626 131 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 GNA15P30679 374 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 GALCP54803 685 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MRPS35P82673 323 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MYCBPAPQ8TBZ2 947 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CASKIN2Q8WXE0 1202 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 RBM15Q96T37 977 aaKnown RBP eCLIP10.8□□□□□ -0.683e-8■■■■■ 33.2
GTF3C1-202ENST00000561623 MRPL40Q9NQ50 206 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 PRDM4Q9UKN5 801 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 UBE4BO95155 1302 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 EMSYQ7Z589 1322 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CYP26A1O43174 497 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 FAM117BQ6P1L5 589 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MMGT1Q8N4V1 131 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TMA16Q96EY4 203 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 VPS39Q96JC1 886 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ZBTB18Q99592 522 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 HACD3Q9P035 362 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TAF6LQ9Y6J9 622 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CFAP74Q9C0B2 1584 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 FAM47DPA6NHR8 397 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 TYK2P29597 1187 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 HADHAP40939 763 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 SCTRP47872 440 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MTM1Q13496 603 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MFSD14CQ5VZR4 134 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 KDM7AQ6ZMT4 941 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC30A5Q8TAD4 765 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 DHX38Q92620 1227 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 GEMIN8Q9NWZ8 242 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 IP6K2Q9UHH9 426 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 B2RBV5 119 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 MYBL1P10243 752 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms