RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MRE11P49959 708 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 EPHB4P54760 987 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 ANTXR2P58335 489 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 SRSF2Q01130 221 aaKnown RBP4.8□□□□□ -1.64
HERC1-215ENST00000561436 PPARAQ07869 468 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 EFEMP1Q12805 493 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 ADAM15Q13444 863 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 DGKDQ16760 1214 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 GJC2Q5T442 439 aaPredicted RBP4.8□□□□□ -1.64
HERC1-215ENST00000561436 FAM102BQ5T8I3 360 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MBNL2Q5VZF2 373 aaKnown RBP4.8□□□□□ -1.64
HERC1-215ENST00000561436 NXNQ6DKJ4 435 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 ZNF585AQ6P3V2 769 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 BMP8AQ7Z5Y6 402 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 PLEKHH3Q7Z736 793 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 PALM2Q8IXS6 379 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 IFNL2Q8IZJ0 200 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MIER2Q8N344 545 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 CPA6Q8N4T0 437 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 HSPBAP1Q96EW2 488 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 LMF1Q96S06 567 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 NOL10Q9BSC4 688 aaKnown RBP4.8□□□□□ -1.64
HERC1-215ENST00000561436 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 KCTD10Q9H3F6 313 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 DENND2AQ9ULE3 1009 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 SLC4A7Q9Y6M7 1214 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 KDM5DQ9BY66 1539 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 FYCO1Q9BQS8 1478 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MBD5Q9P267 1494 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 SAMD9LQ8IVG5 1584 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 STRCQ7RTU9 1775 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 A0A0G2JNJ9 132 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ELL2O00472 640 aaPredicted RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 FOXS1O43638 330 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 PRC1O43663 620 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 CUTAO60888 179 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 DTNBO60941 627 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 AGXTP21549 392 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 LGALS4P56470 323 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 HLTFQ14527 1009 aaKnown RBP eCLIP4.79□□□□□ -1.64
HERC1-215ENST00000561436 MLC1Q15049 377 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 MAN2A1Q16706 1144 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ZNF827Q17R98 1081 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 MUM1Q2TAK8 710 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ANO4Q32M45 955 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 GFOD2Q3B7J2 385 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ZBTB41Q5SVQ8 909 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ERICH6BQ5W0A0 696 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 TCTN3Q6NUS6 607 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 LMBR1LQ6UX01 489 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 GGNQ86UU5 652 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 TAX1BP1Q86VP1 789 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 CIR1Q86X95 450 aaPredicted RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 GLB1L2Q8IW92 636 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 REXO1L1PQ8IX06 675 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 RAVER1Q8IY67 606 aaKnown RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 TCEAL8Q8IYN2 117 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 RTKN2Q8IZC4 609 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 NEIL1Q96FI4 390 aaPredicted RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 TEKT5Q96M29 485 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 ACE2Q9BYF1 805 aaPredicted RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 RHOBTB2Q9BYZ6 727 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 IFT122Q9HBG6 1241 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 SAE1Q9UBE0 346 aaPredicted RBP4.79□□□□□ -1.64
HERC1-215ENST00000561436 Q9UFV3 132 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 DPP7Q9UHL4 492 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 NR2E1Q9Y466 385 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 CEP162Q5TB80 1403 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 NCOA3Q9Y6Q9 1424 aa4.79□□□□□ -1.64
HERC1-215ENST00000561436 PLXNC1O60486 1568 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 CEP170BQ9Y4F5 1589 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 FZD9O00144 591 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 CDC14BO60729 498 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 OPHN1O60890 802 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 LPLP06858 475 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 PFKMP08237 780 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 OSMP13725 252 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 INSRRP14616 1297 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 HSPA6P17066 643 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 MAGEA10P43363 369 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 MTNR1BP49286 362 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 ADAM17P78536 824 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 EIF4HQ15056 248 aaKnown RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 MINDY4Q4G0A6 757 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 AGBL4Q5VU57 503 aa4.78□□□□□ -1.64
HERC1-215ENST00000561436 ZNF772Q68DY9 489 aaPredicted RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 CMTR2Q8IYT2 770 aaKnown RBP4.78□□□□□ -1.64
HERC1-215ENST00000561436 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms