RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 FZD8Q9H461 694 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TBX20Q9UMR3 447 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 ZNF232Q9UNY5 417 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 B4GALT5O43286 388 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 GHRP10912 638 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 DPCR1Q3MIW9 517 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 SYT10Q6XYQ8 523 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 H0YCG3 227 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 EIF3DO15371 548 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERC1-214ENST00000561400 NBNO60934 754 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 TIMP1P01033 207 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 PRKCBP05771 671 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 MAPK6Q16659 721 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
HERC1-214ENST00000561400 CEP290O15078 2479 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 EVI5O60447 810 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 RPS6KA5O75582 802 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 PAX3P23760 479 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 CD52P31358 61 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 MAGEA8P43361 318 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 NLRP12P59046 1061 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ALCAMQ13740 583 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 MAP4K3Q8IVH8 894 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
HERC1-214ENST00000561400 FUCA2Q9BTY2 467 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ZMYM2Q9UBW7 1377 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
HERC1-214ENST00000561400 TISP43B9A030 160 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ACKR2O00590 384 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 RAG1P15918 1043 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
HERC1-214ENST00000561400 TYRO3Q06418 890 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ADSSL1Q8N142 457 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 KIF18AQ8NI77 898 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 HVCN1Q96D96 273 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
HERC1-214ENST00000561400 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
HERC1-214ENST00000561400 PADI3Q9ULW8 664 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 SQORQ9Y6N5 450 aa12.72□□□□□ -0.37
HERC1-214ENST00000561400 TPD52L2O43399 206 aaKnown RBP12.71□□□□□ -0.37
HERC1-214ENST00000561400 TSPAN1O60635 241 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
HERC1-214ENST00000561400 SFPQP23246 707 aaKnown RBP eCLIP12.71□□□□□ -0.37
HERC1-214ENST00000561400 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
HERC1-214ENST00000561400 STRN3Q13033 797 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
HERC1-214ENST00000561400 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 TRIM74Q86UV6 250 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 TRIM73Q86UV7 250 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
HERC1-214ENST00000561400 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 DPF3Q92784 378 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 CPB2Q96IY4 423 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 ACCSQ96QU6 501 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.37
HERC1-214ENST00000561400 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 TGFB1I1O43294 461 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 CCP110O43303 1012 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ERLIN2O94905 339 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 SYN1P17600 705 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 PRPF4BQ13523 1007 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 KNOP1Q1ED39 458 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 KLHL10Q6JEL2 608 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 MLKLQ8NB16 471 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ACO2Q99798 780 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 IFIH1Q9BYX4 1025 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ERVK-5Q9HDB9 667 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 UBE4BO95155 1302 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 HNRNPDLO14979 420 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 GPR182O15218 404 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ECEL1O95672 775 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 PIGRP01833 764 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 CSF2RAP15509 400 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 PMS1P54277 932 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 PAK2Q13177 524 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 PCBP1Q15365 356 aaKnown RBP eCLIP12.7□□□□□ -0.38
HERC1-214ENST00000561400 STX1AQ16623 288 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms