RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 GPC2Q8N158 579 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 OR2W6PQ8NHA6 318 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 UHMK1Q8TAS1 419 aaKnown RBP7.22□□□□□ -1.25
LRRC28-220ENST00000561253 ZNF384Q8TF68 577 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 GCC1Q96CN9 775 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 ZBED3Q96IU2 234 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-220ENST00000561253 MXD3Q9BW11 206 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 LRRCC1Q9C099 1032 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 CCDC8Q9H0W5 538 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-220ENST00000561253 SMOC1Q9H4F8 434 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
LRRC28-220ENST00000561253 AKAP11Q9UKA4 1901 aa7.21□□□□□ -1.25
LRRC28-220ENST00000561253 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 TRAF5O00463 557 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 PAPLNO95428 1278 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 JUNBP17275 347 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 MCAMP43121 646 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 GMPSP49915 693 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 ZNF280AP59817 542 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 ANAPC15P60006 121 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 AMPD3Q01432 767 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 NUCB1Q02818 461 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 STRN3Q13033 797 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 OS9Q13438 667 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 DHCR24Q15392 516 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 ARHGAP44Q17R89 818 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 ERICH6BQ5W0A0 696 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 OLFML2BQ68BL8 750 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 RPTNQ6XPR3 784 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 AACSQ86V21 672 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 PTRH1Q86Y79 214 aaKnown RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 C16orf71Q8IYS4 520 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 CLASRPQ8N2M8 674 aaKnown RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 PHOSPHO1Q8TCT1 267 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 FAM168AQ92567 244 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 DPF2Q92785 391 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 USP7Q93009 1102 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 RWDD1Q9H446 243 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-220ENST00000561253 HMG20BQ9P0W2 317 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 B4GALT6Q9UBX8 382 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 PALD1Q9ULE6 856 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 PCDHB4Q9Y5E5 795 aa7.21□□□□□ -1.26
LRRC28-220ENST00000561253 TCRBV5S4A2TA0A5A2 114 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SLC12A8A0AV02 714 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 ABLIM1O14639 778 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SLC27A2O14975 620 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SGSM2O43147 1006 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 TADA3O75528 432 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 F2P00734 622 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 AMY2AP04746 511 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 ITGB5P18084 799 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 AMY2BP19961 511 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 RPS12P25398 132 aaKnown RBP7.2□□□□□ -1.26
LRRC28-220ENST00000561253 EPS15P42566 896 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 MAPKAPK2P49137 400 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 MECP2P51608 486 aaKnown RBP7.2□□□□□ -1.26
LRRC28-220ENST00000561253 IGBP1P78318 339 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SLC9A5Q14940 896 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 TNIP1Q15025 636 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 CAVIN4Q5BKX8 364 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 TTLL5Q6EMB2 1281 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 ANKRD13AQ8IZ07 590 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 NLGN4XQ8N0W4 816 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 NXPE1Q8N323 547 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 AFAP1L2Q8N4X5 818 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 AGBL3Q8NEM8 1001 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 BOCQ9BWV1 1114 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SMURF1Q9HCE7 757 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 GPRC5DQ9NZD1 345 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 KLHL14Q9P2G3 628 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 STAP2Q9UGK3 403 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 MCM8Q9UJA3 840 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 SRPK3Q9UPE1 567 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 AOX1Q06278 1338 aa7.2□□□□□ -1.26
LRRC28-220ENST00000561253 ADAMTSL1Q8N6G6 1762 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 PTPDC1A2A3K4 754 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 ZNF891A8MT65 544 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-220ENST00000561253 KCNK3O14649 394 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 KRT37O76014 449 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 ATP5JP18859 108 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 YY1P25490 414 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 PRDX5P30044 214 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 IL2P60568 153 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 PRR5P85299 388 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 SKOR2Q2VWA4 1001 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-220ENST00000561253 PLEKHN1Q494U1 663 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-220ENST00000561253 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 ZC3H14Q6PJT7 736 aaKnown RBP7.19□□□□□ -1.26
LRRC28-220ENST00000561253 HHIPL2Q6UWX4 724 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 STRA8Q7Z7C7 330 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 CHD1LQ86WJ1 897 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 TRIM48Q8IWZ4 208 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 SPATA5Q8NB90 893 aa7.19□□□□□ -1.26
LRRC28-220ENST00000561253 ATL2Q8NHH9 583 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms