RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
TPM1-229ENST00000561242 ADGRA3Q8IWK6 1321 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 FAM237AA0A1B0GTK4 181 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 PRPF6O94906 941 aaKnown RBP11.69□□□□□ -0.54
TPM1-229ENST00000561242 RB1P06400 928 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 FGFR1P11362 822 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 MAPK7Q13164 816 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 DSC3Q14574 896 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 KCNB1Q14721 858 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 GPNMBQ14956 572 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 ZC2HC1CQ53FD0 456 aaPredicted RBP11.69□□□□□ -0.54
TPM1-229ENST00000561242 RASIP1Q5U651 963 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 KIAA1841Q6NSI8 718 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 GPR153Q6NV75 609 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 CDR2LQ86X02 465 aaPredicted RBP11.69□□□□□ -0.54
TPM1-229ENST00000561242 NELFCDQ8IXH7 590 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
TPM1-229ENST00000561242 GRAMD1CQ8IYS0 662 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 FMR1NBQ8N0W7 255 aaPredicted RBP11.69□□□□□ -0.54
TPM1-229ENST00000561242 DAW1Q8N136 415 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 DNAJC19Q96DA6 116 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 TSPAN18Q96SJ8 248 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 GOLPH3LQ9H4A5 285 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 SNTG2Q9NY99 539 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
TPM1-229ENST00000561242 ARHGEF37A1IGU5 675 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 PSMA7O14818 248 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 OGTO15294 1046 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 MGEA5O60502 916 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 EXOC3O60645 756 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 ZC3H11AO75152 810 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM1-229ENST00000561242 TADA2AO75478 443 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 POMCP01189 267 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 KRT13P13646 458 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 GARTP22102 1010 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 AKAP5P24588 427 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 GRM5P41594 1212 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 OR1G1P47890 313 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 CAMK4Q16566 473 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 KNOP1Q1ED39 458 aaKnown RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 NT5DC1Q5TFE4 455 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 MRPL10Q7Z7H8 261 aaKnown RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 MAP4K3Q8IVH8 894 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 TMEM192Q8IY95 271 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 LPPQ93052 612 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
TPM1-229ENST00000561242 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 PLEKHA5Q9HAU0 1116 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 KLK14Q9P0G3 267 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
TPM1-229ENST00000561242 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 PHACTR2O75167 634 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 IL18RAPO95256 599 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 MYBP10242 640 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 BMPR1AP36894 532 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 MLH1P40692 756 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 MCL1Q07820 350 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 GPM6BQ13491 265 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 PNOCQ13519 176 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 SKIV2LQ15477 1246 aaKnown RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 BEST2Q8NFU1 509 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 GAD1Q99259 594 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 FAM213AQ9BRX8 229 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 DNAI2Q9GZS0 605 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
TPM1-229ENST00000561242 NUB1Q9Y5A7 615 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
TPM1-229ENST00000561242 ARL5CA6NH57 179 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 CETN3O15182 167 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 OFD1O75665 1012 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 RECQL4O94761 1208 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 RHOBTB3O94955 611 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 TPM2P07951 284 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 ATF7P17544 494 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms