RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 NID2Q14112 1375 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 FANCMQ8IYD8 2048 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 DOCK6Q96HP0 2047 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 CCDC194A0A1B0GVG4 234 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 MED19A0JLT2 244 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 F8W810 466 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 EDIL3O43854 480 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 LILRB3O75022 631 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 EMC2Q15006 297 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 UBXN11Q5T124 520 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 NCAPH2Q6IBW4 605 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 NOTUMQ6P988 496 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 COLGALT2Q8IYK4 626 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 ETNPPLQ8TBG4 499 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZFP42Q96MM3 310 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 MTRQ99707 1265 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 EIF2AQ9BY44 585 aaKnown RBP11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 FOXQ1Q9C009 403 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 PLEKHA4Q9H4M7 779 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 NCDNQ9UBB6 729 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 EPS15L1Q9UBC2 864 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 SNX14Q9Y5W7 946 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
CDC42BPB-207ENST00000560492 DMDP11532 3685 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 EML1O00423 815 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 TGM5O43548 720 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 SLC37A4O43826 429 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 TADA2AO75478 443 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 DEXIO95424 95 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 P4HBP07237 508 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 SP9P0CG40 484 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 LAMP2P13473 410 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 FSHRP23945 695 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 PSMA5P28066 241 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 YWHABP31946 246 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 DSG1Q02413 1049 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 STK3Q13188 491 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 TFDP1Q14186 410 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 PUM1Q14671 1186 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 UBXN2BQ14CS0 331 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 NTRK3Q16288 839 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 USP41Q3LFD5 358 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 LIN9Q5TKA1 542 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 FUT10Q6P4F1 479 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 CEP57Q86XR8 500 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 C1orf210Q8IVY1 113 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 DCLK2Q8N568 766 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 SMG8Q8ND04 991 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 RUBCNQ92622 972 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 SHDQ96IW2 340 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 LXNQ9BS40 222 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 SPATA6Q9NWH7 488 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 PARP2Q9UGN5 583 aa11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPB-207ENST00000560492 PATJQ8NI35 1801 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 FRYLO94915 3013 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CYP3A7-CYP3A51PA0A087WV96 503 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 ASAP2O43150 1006 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 LAMTOR5O43504 91 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 TSPAN1O60635 241 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 NPTXRO95502 500 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CYP3A7P24462 503 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 AKAP5P24588 427 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 AXLP30530 894 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 HOXA11P31270 313 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CREMQ03060 361 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 KIAA0319Q5VV43 1072 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PRSS55Q6UWB4 352 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 TMEM92Q6UXU6 159 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 GRASPQ7Z6J2 395 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CDR2LQ86X02 465 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PJA1Q8NG27 643 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 HASPINQ8TF76 798 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 HDAC7Q8WUI4 952 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZNF707Q96C28 371 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 DYDC2Q96IM9 177 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 BCO2Q9BYV7 579 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms