RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TCHPQ9BT92 498 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 FAM49AQ9H0Q0 323 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-209ENST00000560463 ADAMTS10Q9H324 1103 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 PTPRHQ9HD43 1115 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 ANKFY1Q9P2R3 1169 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 PHF24Q9UPV7 400 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 SIK3Q9Y2K2 1263 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 DAAM1Q9Y4D1 1078 aa9.37□□□□□ -0.91
TRAF3-209ENST00000560463 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 A0A1B0GUA9 196 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 GOLGA8IPA6NC78 632 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 GOLGA8JA6NMD2 632 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 AKR1B15C9JRZ8 316 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 DNM1LO00429 736 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 ABLIM1O14639 778 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CAND2O75155 1236 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 GYPCP04921 128 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 MCF2P10911 925 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 DARSP14868 501 aaKnown RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CAPN2P17655 700 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 TRIM21P19474 475 aaKnown RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CASP14P31944 242 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 AP3M2P53677 418 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CLDN10P78369 228 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 RBL2Q08999 1139 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 KCNMA1Q12791 1236 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 PTK7Q13308 1070 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 PSMD6Q15008 389 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 AMHR2Q16671 573 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 EXOC3L4Q17RC7 722 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 KIZQ2M2Z5 673 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 GDF6Q6KF10 455 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 FBXO46Q6PJ61 603 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CBWD2Q8IUF1 395 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 ZBTB45Q96K62 511 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 PANX2Q96RD6 677 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 FAM213AQ9BRX8 229 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 TTYH3Q9C0H2 523 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 HAPLN2Q9GZV7 340 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 PLCB1Q9NQ66 1216 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 CAPN11Q9UMQ6 739 aa9.36□□□□□ -0.91
TRAF3-209ENST00000560463 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
TRAF3-209ENST00000560463 BRCA2P51587 3418 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TET1Q8NFU7 2136 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 GRIN2DO15399 1336 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 A0A1W2PQ45 241 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 A0A1W2PQY0 241 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 FAM189A1O60320 539 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TSPAN1O60635 241 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 MFAP3LO75121 409 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 IL18RAPO95256 599 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ADRB2P07550 413 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 CCL5P13501 91 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ARF4P18085 180 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 MRPS6P82932 125 aaKnown RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ZBED6P86452 979 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TMEM62Q0P6H9 643 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 SNX17Q15036 470 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 PTGISQ16647 500 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TSR1Q2NL82 804 aaKnown RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 DCAF4L1Q3SXM0 396 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ZNF568Q3ZCX4 644 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 FNDC1Q4ZHG4 1894 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 KRT39Q6A163 491 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 NOTUMQ6P988 496 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 SLC27A1Q6PCB7 646 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 CRELD2Q6UXH1 353 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TC2NQ8N9U0 490 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ZSWIM2Q8NEG5 633 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ZNF668Q96K58 619 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 FNBP1Q96RU3 617 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 OSMRQ99650 979 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 NAA15Q9BXJ9 866 aaKnown RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 MMRN2Q9H8L6 949 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TMEM8AQ9HCN3 771 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 CPSF3Q9UKF6 684 aaKnown RBP9.35□□□□□ -0.91
TRAF3-209ENST00000560463 OGDHLQ9ULD0 1010 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 USP20Q9Y2K6 914 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 ZKSCAN5Q9Y2L8 839 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TRPV2Q9Y5S1 764 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 SQORQ9Y6N5 450 aa9.35□□□□□ -0.91
TRAF3-209ENST00000560463 TTC26A0AVF1 554 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms