RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 MAPK13O15264 365 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 OGTO15294 1046 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 EXTL3O43909 919 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 EXOC3O60645 756 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 AKAP3O75969 853 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 GNA14O95837 355 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 TIMP1P01033 207 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 CXCL10P02778 98 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 CYP2C18P33260 490 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 PSMC2P35998 433 aaKnown RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.036e-7■■■■□ 23.5
HMBOX1-213ENST00000560269 CASP4P49662 377 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 MARSP56192 900 aaKnown RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 NFX1Q12986 1120 aaKnown RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 HSP90AA2PQ14568 343 aaPredicted RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 DSC3Q14574 896 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 UVSSAQ2YD98 709 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 DCAF4L1Q3SXM0 396 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 PLEKHG4Q58EX7 1191 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 UBXN11Q5T124 520 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 APBB1IPQ7Z5R6 666 aaPredicted RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 ZBTB33Q86T24 672 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 CDR2LQ86X02 465 aaPredicted RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 FAM114A1Q8IWE2 563 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 GPD1LQ8N335 351 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 ZSWIM2Q8NEG5 633 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 ADPGKQ9BRR6 497 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 KIAA1586Q9HCI6 787 aa14.89□□□□□ -0.03
HMBOX1-213ENST00000560269 SCN5AQ14524 2016 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 CCDC85CA6NKD9 419 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 EEF1GP26641 437 aaKnown RBP14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 RFC2P35250 354 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 CCL23P55773 120 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 MCCD1P59942 119 aaPredicted RBP14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 SPAG1Q07617 926 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 GSE1Q14687 1217 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 CEP135Q66GS9 1140 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 CRELD2Q6UXH1 353 aaPredicted RBP14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 SAAL1Q96ER3 474 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 BORCS6Q96GS4 357 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 SCLYQ96I15 445 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 CNOT6LQ96LI5 555 aaKnown RBP14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 HTATIP2Q9BUP3 242 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 TRAIPQ9BWF2 469 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 IFIH1Q9BYX4 1025 aaKnown RBP14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 FRMD4BQ9Y2L6 1034 aa14.88□□□□□ -0.03
HMBOX1-213ENST00000560269 GOLGA8IPA6NC78 632 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 GOLGA8JA6NMD2 632 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 KCNJ18B7U540 433 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 NPTXRO95502 500 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 EPB41P11171 864 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 ZSCAN20P17040 1043 aaPredicted RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 ITGB8P26012 769 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 POU5F1Q01860 360 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 KCNJ12Q14500 433 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 SNRNP35Q16560 246 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 KYAT1Q16773 422 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 TCP11X2Q5H9J9 407 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 FRMD5Q7Z6J6 570 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 APBB2Q92870 758 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 FAM213AQ9BRX8 229 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 FTHL17Q9BXU8 183 aa14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 EIF2AQ9BY44 585 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 METTL14Q9HCE5 456 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 MAGEC2Q9UBF1 373 aaPredicted RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 LIMA1Q9UHB6 759 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 CPSF3Q9UKF6 684 aaKnown RBP14.87□□□□□ -0.03
HMBOX1-213ENST00000560269 ZNF233A6NK53 670 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 MGEA5O60502 916 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 ADRB2P07550 413 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 HARSP12081 509 aaKnown RBP14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 ATP1A3P13637 1013 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 RAG1P15918 1043 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 GRM5P41594 1212 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 ENPEPQ07075 957 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 CCDC40Q4G0X9 1142 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 ZBTB41Q5SVQ8 909 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 TWF2Q6IBS0 349 aaKnown RBP14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 MFSD5Q6N075 450 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 APTXQ7Z2E3 356 aaKnown RBP14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 CBWD2Q8IUF1 395 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 CEP120Q8N960 986 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 RDH13Q8NBN7 331 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 DBF4BQ8NFT6 615 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 SEPT8Q92599 483 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 MFSD14AQ96MC6 490 aa14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 PRDM5Q9NQX1 630 aaPredicted RBP14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 ARMCX3Q9UH62 379 aaPredicted RBP14.86□□□□□ -0.03
HMBOX1-213ENST00000560269 LTBP2Q14767 1821 aa14.85□□□□□ -0.03
HMBOX1-213ENST00000560269 LRRC10BA6NIK2 292 aa14.85□□□□□ -0.03
HMBOX1-213ENST00000560269 ZNF623O75123 536 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms