RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 FAM189BP81408 668 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 HNRNPA0Q13151 305 aaKnown RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 MRPL49Q13405 166 aaKnown RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 CDYL2Q8N8U2 506 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 LSM14BQ9BX40 385 aaKnown RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 SERHL2Q9H4I8 314 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 IFT57Q9NWB7 429 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 H2AFY2Q9P0M6 372 aaPredicted RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 ANKFY1Q9P2R3 1169 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 EFCAB5A4FU69 1503 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 DISP1Q96F81 1524 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 KIAA0556O60303 1618 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 SUPT6HQ7KZ85 1726 aaKnown RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 CFAP74Q9C0B2 1584 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 AKNAQ7Z591 1439 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 UGGT2Q9NYU1 1516 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 ELL2O00472 640 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 RNASET2O00584 256 aaKnown RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 PPP1R12AO14974 1030 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 ZEB1P37275 1124 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 GZMKP49863 264 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 DUSP2Q05923 314 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 SQSTM1Q13501 440 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 Q6YL49 198 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 ESPNLQ6ZVH7 1005 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 DOK3Q7L591 496 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 GDF7Q7Z4P5 450 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 LILRA3Q8N6C8 439 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 SUPT20HQ8NEM7 779 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 FERMT2Q96AC1 680 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 OSBPL2Q9H1P3 480 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 AKIP1Q9NQ31 210 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.99□□□□□ -1.61
LRRC28-218ENST00000560236 USP18Q9UMW8 372 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 MAGI2Q86UL8 1455 aa4.99□□□□□ -1.61
LRRC28-218ENST00000560236 ZMYM4Q5VZL5 1548 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 SIGLEC1Q9BZZ2 1709 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 TMEM200CA6NKL6 621 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 PRR5-ARHGAP8B1AHC4 643 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 GAS7O60861 476 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 NCR1O76036 304 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 XPAP23025 273 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 LRRC32Q14392 662 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 TAS1R1Q7RTX1 841 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 XYLT1Q86Y38 959 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 PASD1Q8IV76 773 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 NTN5Q8WTR8 489 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 BBC3Q96PG8 261 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 SYNPO2LQ9H987 977 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 SPON1Q9HCB6 807 aa4.98□□□□□ -1.61
LRRC28-218ENST00000560236 INTS7Q9NVH2 962 aaKnown RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 USP36Q9P275 1121 aaKnown RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 MAGEC2Q9UBF1 373 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 CDK11AQ9UQ88 783 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-218ENST00000560236 ARHGEF12Q9NZN5 1544 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 C3P01024 1663 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ABCA8O94911 1581 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 GAGE12BA1L429 117 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 GAGE12HA6NDE8 117 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 NRP2O60462 931 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 NDUFA10O95299 355 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 HSP90B1P14625 803 aaKnown RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 C21orf58P58505 322 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 SF3A1Q15459 793 aaKnown RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 NFE2L2Q16236 605 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 CCDC62Q6P9F0 684 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 SYCE2Q6PIF2 218 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 LMBR1LQ6UX01 489 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ARHGEF19Q8IW93 802 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 CMTR2Q8IYT2 770 aaKnown RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 MSL3Q8N5Y2 521 aaKnown RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 EFHBQ8N7U6 833 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 FDXACB1Q9BRP7 624 aaPredicted RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ORAI3Q9BRQ5 295 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
LRRC28-218ENST00000560236 MSRAQ9UJ68 235 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 CLCA2Q9UQC9 943 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 CHST2Q9Y4C5 530 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 ZFYVE16Q7Z3T8 1539 aa4.97□□□□□ -1.61
LRRC28-218ENST00000560236 PCSK5Q92824 1860 aa4.96□□□□□ -1.61
LRRC28-218ENST00000560236 DENND4BO75064 1496 aaPredicted RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 LEFTY2O00292 366 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 KPNA6O60684 536 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 TOM1O60784 492 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 RFPL3O75679 317 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 SEC24DO94855 1032 aaPredicted RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 F2P00734 622 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 PFKMP08237 780 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 CD38P28907 300 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 HSPA1LP34931 641 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 AVPR1BP47901 424 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 GPR15P49685 360 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 NRG3P56975 720 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 NHLH2Q02577 135 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 PABPC4Q13310 644 aaKnown RBP eCLIP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms